FFCP PHASE1:Hg19::chr6:21200990..21201016,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54901 | |EntrezGene=54901 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21050 | |HGNC=21050 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-26bp_to_ENST00000476517_5end | |association_with_transcript=-26bp_to_ENST00000476517_5end | ||
|cluster_id=chr6:21200990..21201016,+ | |||
|coexpression_cluster_id=C97 | |coexpression_cluster_id=C97 | ||
|description=CAGE_peak_3_at_CDKAL1_5end | |description=CAGE_peak_3_at_CDKAL1_5end | ||
|id=chr6:21200990..21201016,+ | |id=chr6:21200990..21201016,+ | ||
|ontology_enrichment_celltype=CL:0002138;6.83e-27;6!CL:1001319;3.45e-11;1!CL:1000600;3.45e-11;1!CL:0002139;2.25e-10;24 | |ontology_enrichment_celltype=CL:0005020!3.43e-09!6;CL:0002138!3.43e-09!6;CL:0005022!3.43e-09!6 | ||
| | |ontology_enrichment_celltype_v019=CL:0002138;6.83e-27;6!CL:1001319;3.45e-11;1!CL:1000600;3.45e-11;1!CL:0002139;2.25e-10;24 | ||
|ontology_enrichment_disease=DOID:2355;1.01e-11;1!DOID:630;1.45e-11;1!DOID:0050177;1.45e-11;1!DOID:0050427;1.45e-11;1 | |ontology_enrichment_celltype_v019_2=CL:0005020,4.90e-27,6;CL:0002138,4.90e-27,6;CL:0005022,4.90e-27,6;CL:1001319,2.18e-11,1;CL:1000600,2.18e-11,1;CL:0002139,2.08e-10,24;CL:0000115,6.91e-07,36 | ||
|ontology_enrichment_uberon=UBERON:0001473;2.96e-20;8!UBERON:0004536;2.96e-20;8!UBERON:0006558;2.96e-20;8!UBERON:0002465;2.91e-16;10!UBERON:0004645;3.45e-11;1!UBERON:0001256;3.45e-11;1!UBERON:0001259;3.45e-11;1 | |ontology_enrichment_development_v019=CL:0005022;6.83e-27;6!UBERON:0003124;3.45e-11;1 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;1.01e-11;1!DOID:630;1.45e-11;1!DOID:0050177;1.45e-11;1!DOID:0050427;1.45e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,1.06e-11,1;DOID:630,1.31e-11,1;DOID:0050177,1.31e-11,1;DOID:0050427,1.31e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002465!6.09e-07!10;UBERON:0001473!9.99e-07!8;UBERON:0004536!9.99e-07!8;UBERON:0006558!9.99e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;2.96e-20;8!UBERON:0004536;2.96e-20;8!UBERON:0006558;2.96e-20;8!UBERON:0002465;2.91e-16;10!UBERON:0004645;3.45e-11;1!UBERON:0001256;3.45e-11;1!UBERON:0001259;3.45e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,2.31e-20,8;UBERON:0004536,2.31e-20,8;UBERON:0006558,2.31e-20,8;UBERON:0002465,2.39e-16,10;UBERON:0004645,2.18e-11,1;UBERON:0001256,2.18e-11,1;UBERON:0001259,2.18e-11,1 | |||
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| ||
|short_description=p3@CDKAL1 | |short_description=p3@CDKAL1 | ||
}} | }} |
Latest revision as of 03:34, 17 September 2015
Short description: | p3@CDKAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDKAL1_5end |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | -26bp_to_ENST00000476517_5end |
EntrezGene: | CDKAL1 |
HGNC: | 21050 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 4.90e-27 | 6 |
endothelial cell of lymphatic vessel | 4.90e-27 | 6 |
vascular lymphangioblast | 4.90e-27 | 6 |
bladder cell | 2.18e-11 | 1 |
lower urinary tract cell | 2.18e-11 | 1 |
endothelial cell of vascular tree | 2.08e-10 | 24 |
endothelial cell | 6.91e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 2.31e-20 | 8 |
lymph vasculature | 2.31e-20 | 8 |
lymphatic part of lymphoid system | 2.31e-20 | 8 |
lymphoid system | 2.39e-16 | 10 |
urinary bladder urothelium | 2.18e-11 | 1 |
wall of urinary bladder | 2.18e-11 | 1 |
mucosa of urinary bladder | 2.18e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.06e-11 | 1 |
genetic disease | 1.31e-11 | 1 |
monogenic disease | 1.31e-11 | 1 |
xeroderma pigmentosum | 1.31e-11 | 1 |