FFCP PHASE1:Hg19::chr6:21200990..21201016,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54901 | |EntrezGene=54901 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21050 | |HGNC=21050 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-26bp_to_ENST00000476517_5end | |||
|cluster_id=chr6:21200990..21201016,+ | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_3_at_CDKAL1_5end | |||
|id=chr6:21200990..21201016,+ | |||
|ontology_enrichment_celltype=CL:0005020!3.43e-09!6;CL:0002138!3.43e-09!6;CL:0005022!3.43e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0002138;6.83e-27;6!CL:1001319;3.45e-11;1!CL:1000600;3.45e-11;1!CL:0002139;2.25e-10;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,4.90e-27,6;CL:0002138,4.90e-27,6;CL:0005022,4.90e-27,6;CL:1001319,2.18e-11,1;CL:1000600,2.18e-11,1;CL:0002139,2.08e-10,24;CL:0000115,6.91e-07,36 | |||
|ontology_enrichment_development_v019=CL:0005022;6.83e-27;6!UBERON:0003124;3.45e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;1.01e-11;1!DOID:630;1.45e-11;1!DOID:0050177;1.45e-11;1!DOID:0050427;1.45e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,1.06e-11,1;DOID:630,1.31e-11,1;DOID:0050177,1.31e-11,1;DOID:0050427,1.31e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002465!6.09e-07!10;UBERON:0001473!9.99e-07!8;UBERON:0004536!9.99e-07!8;UBERON:0006558!9.99e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;2.96e-20;8!UBERON:0004536;2.96e-20;8!UBERON:0006558;2.96e-20;8!UBERON:0002465;2.91e-16;10!UBERON:0004645;3.45e-11;1!UBERON:0001256;3.45e-11;1!UBERON:0001259;3.45e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,2.31e-20,8;UBERON:0004536,2.31e-20,8;UBERON:0006558,2.31e-20,8;UBERON:0002465,2.39e-16,10;UBERON:0004645,2.18e-11,1;UBERON:0001256,2.18e-11,1;UBERON:0001259,2.18e-11,1 | |||
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| |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,1.80808358407193,0,0.487932798790507,0,0,0.313454721478088,0.572471974262113,0,0,0.382067028739756,0.492603536699674,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.283604451492204,0.443458794925128,0,0.196468613246569,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,1.42306505074684,1.67360306382335,2.41697590265488,0,0.24406205754817,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0.286804595389004,0.121973706129595,0,0.348581828608555,0.414644220061482,0.504641701751257,0,0,0,1.38134921352481,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15930404975077,0.117408694235822,2.45422961193825,2.77791307545966,0.761016608938393,0,0,0,0,0,0.93733833986777,0,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03275699377971,0,0,0.167516265334349,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0,0,0.182091168006717,0.131124414959424,0,0.462092022626489,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06461206063404,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13654458722565,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,1.73110911793673,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0.91821828489147,0.126373159256976,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596143835108969,0.126621591911757,0,0,0,0,0,0.343609788497747,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,6.26582657286805,0,0,0,0,0,0,0,0.121499113316049,0,0,0.944182586429966,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.213574825135389,0.943225830597996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0.899606224327209,0,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0.219284049578707,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,0.323474434190045,0,6.98941684428889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0.546974809018219,0,0,0.351742488719241,0.127762427639595,0,0,0,0,1.50794029276486,0,0,0,0,0,0,0,0,0,0.913158720509496,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,14.6433958259673,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,0,0.872701380680755,0,0,0,0,0,0.109265571963696,0,0,0,0.551369397209069,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0.0673520530145875,0,0,1.79087190944144,0.106727345877715,0,0,0,0.122241444182866,0,0,0.201273793591026,2.56454793842586 | ||
|short_description=p3@CDKAL1 | |||
}} | }} |
Latest revision as of 03:34, 17 September 2015
Short description: | p3@CDKAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDKAL1_5end |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | -26bp_to_ENST00000476517_5end |
EntrezGene: | CDKAL1 |
HGNC: | 21050 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 4.90e-27 | 6 |
endothelial cell of lymphatic vessel | 4.90e-27 | 6 |
vascular lymphangioblast | 4.90e-27 | 6 |
bladder cell | 2.18e-11 | 1 |
lower urinary tract cell | 2.18e-11 | 1 |
endothelial cell of vascular tree | 2.08e-10 | 24 |
endothelial cell | 6.91e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 2.31e-20 | 8 |
lymph vasculature | 2.31e-20 | 8 |
lymphatic part of lymphoid system | 2.31e-20 | 8 |
lymphoid system | 2.39e-16 | 10 |
urinary bladder urothelium | 2.18e-11 | 1 |
wall of urinary bladder | 2.18e-11 | 1 |
mucosa of urinary bladder | 2.18e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.06e-11 | 1 |
genetic disease | 1.31e-11 | 1 |
monogenic disease | 1.31e-11 | 1 |
xeroderma pigmentosum | 1.31e-11 | 1 |