FFCP PHASE1:Hg19::chr10:13390193..13390218,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:13390193..13390218,-
|short_description=p4@SEPHS1
|description=CAGE_peak_4_at_SEPHS1_5end
|association_with_transcript=61bp_to_ENST00000378614,ENST0000054...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22929 | |EntrezGene=22929 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19685 | |HGNC=19685 | ||
|UniProt=Q5T5U9, | |TSSclassifier=strong | ||
|UniProt=Q5T5U9,D6PSQ9 | |||
|association_with_transcript=61bp_to_ENST00000378614,ENST00000545675,uc001imk.2,uc009xje.2,uc010qbt.1_5end | |||
|cluster_id=chr10:13390193..13390218,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_4_at_SEPHS1_5end | |||
|id=chr10:13390193..13390218,- | |||
|ontology_enrichment_celltype=CL:0000066!9.55e-13!254;CL:0002321!1.00e-07!248;CL:0000220!3.58e-07!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.08e-12,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!7.39e-25!235;DOID:14566!4.42e-23!239;DOID:0050687!9.77e-16!143;DOID:305!1.24e-11!106;DOID:0050686!2.97e-08!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.30e-24,235;DOID:14566,2.17e-22,239;DOID:0050687,3.22e-16,143;DOID:305,1.60e-12,106;DOID:0050686,1.74e-07,137;DOID:7,9.30e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0.642301571672949,0,0,0.893922188854576,0,0,0,0.522371256399677,0.982935746006035,1.39560233594486,1.52908960491121,0.791300934685361,0.37129905888014,1.32558950291166,0,0.602694528023977,0,0.487932798790507,1.10808952269109,2.04000691244253,3.76145665773705,2.28988789704845,3.55873505189499,2.51085279189606,0.840547463227464,1.55991119954897,1.18066171970519,0,1.15148819429164,0.619264493264304,1.83884244895785,1.50602959389125,0,3.33108962495297,2.98555388223585,0.880801318004542,0.553995408531877,0.200544447470142,0.651032612147555,0.671746422719773,0.32389366601898,0,0,0,0,0,0.411167888021826,0,0,0.768482119587302,0,0,0,0,0.188242339542605,0.818718450173537,0,0,0,0.639337125799041,0.329851300186716,0.199463657621632,1.27867425159808,0,0,0.622822248995575,0.251248665256743,0,0.434377689410233,1.21079900526674,0,0,0,0.212604299965044,0,0.22465726229299,0,0.16072558669708,0.285012743741249,0,0,0,0,0.889509253863555,0.426730222566507,0.400395987036012,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0.790152254325231,0.590129310341499,0,0.411202997999018,0.501559486172034,0,0.946895611469467,1.94826728407911,0.557052284425868,0,0,0,1.92136979588513,0.260118695119756,0.328875809207352,0.552700035571697,0,0.14828656316206,0.267540828089713,1.04535523804977,0.453237370790265,0.766440987203842,0.34362744548263,0,0.318565414324097,0,0,0,0.255973222308837,1.24930726552346,0.473554504088034,0,0.80642697289893,0.534880391567015,0.434473211648397,2.43806866313962,1.34140171940727,2.17366355134002,1.44575660953827,1.00267582127178,1.44846518960824,0.795285947051099,0.486634870302636,0.945348171640679,1.99556457716308,2.19586964232815,1.11332214173056,0,2.59549109949101,1.29818957461873,3.65672448328461,3.58986493400936,1.19245312152671,2.28797964312051,1.11437250398869,2.38514888840046,0,1.73570250803797,2.26123176769604,1.67799774483962,2.47606237746061,1.46296476575767,0.516833518338658,2.13459757612026,0.66944122552934,1.61131726843659,1.52054421143703,2.4406205754817,0.735326160691737,0.81014194788176,1.87529429396568,2.46982309888787,1.68917220724983,3.06633274931766,2.84779697870439,3.66403487860815,0,0,0.436094052142534,1.49091585508596,1.77282716330412,0.264818361626438,0,1.77334191099179,2.24271040056923,2.1349799145941,2.22000793575444,1.24484414159907,1.34710672069688,1.30769522490767,0.454072282934794,0,1.87457145467037,0.624320153660641,1.71141546463335,0.747243402759005,1.05691048779388,1.13311061057692,0.702254033511242,1.63323337003915,2.33385202892359,1.96318984233954,2.37600571456411,1.7308685049499,0.910161361938026,1.43723628363248,2.69337782326506,3.87867411603089,1.6623846929051,0.877955241761676,2.45190236639216,1.50238058906597,3.97012641060074,0.538168907066586,0.640672166455702,0.635795703478686,0,0.206105058476878,0.515281080091258,0.18611685633159,0.675105328965065,1.07180705677318,0,0.552299391853796,0,0,1.20902517873168,2.7129694769678,0,0.818238361772504,1.14721838155602,20.1256615113832,11.1325005390048,21.7282673165999,12.4393266018445,22.2042348770553,2.91981887260664,1.56449532329816,0,0,0.464367928031979,0.721879481669586,1.77460200059766,1.85443159085912,1.44606617930089,1.43382164552112,1.52515610864684,2.37270619111097,1.75280700608214,1.37355025587742,1.15424147083917,0.738155454624648,2.80483547606892,2.057870056657,1.47008711385542,1.26755034821831,0,0,0.882926198829301,2.58275720940538,1.02940686179115,0.219500570817251,0,0.904760751704678,0.740707561268237,0.977424915930974,5.19967392639789,0,0.927443239800615,1.29149563659404,1.44366447761074,6.01881166349594,1.33177906564219,3.1608175918371,1.71697232418975,0.246217006087397,0.234004265139238,0.594524649154913,0,0.671928512795438,0.850650583454319,0.716468181622786,0.290633938513962,1.91691339582606,0.492663237895943,0.44024217006613,0.414656231081544,0.144119953416961,0.37872730027914,0.888970520090367,0.763976851116555,2.34434894420094,0,1.02827492703324,0.600686115687835,1.14330573052231,1.45770409648969,1.74384027533312,1.24675085895615,0.646358578788889,0,1.690605505112,0,0,4.11531798819427,11.3479305618623,2.66422179016099,1.14382394926518,1.08524321078289,4.93944202068461,1.62868092146868,0.355391948742546,3.16780749173372,0.904318131178758,0.871533458600294,1.29964888536674,1.2162378064119,1.50677127429638,0,1.4377491329495,0,1.42636905040718,1.15825045334063,1.02738161275192,1.07436577943937,2.12961773587702,0.591092280605782,0.646882724578552,0.898401253958239,2.03275699377971,1.30139853857622,0.773288812777695,1.50764638800914,1.91381625495949,0,0,0,0.49076596687656,0,0,1.03985430765404,1.60586089917446,1.26161932027148,1.05427273493442,1.80567659836631,0,1.03473071292505,3.98535359121262,4.42486004500088,1.12948698808508,1.17480694477644,1.02943027143257,0.413536052245775,0.647142602455851,0.426910231213777,0.303127571446259,1.66435439510497,1.81434175997808,0.248107807818777,0,0.841980283299221,0.640695746278505,0.511707249066704,0.804269605718038,0,1.23367755042124,1.77561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| ||
|short_description=p4@SEPHS1 | |||
}} | }} |
Latest revision as of 03:40, 17 September 2015
Short description: | p4@SEPHS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SEPHS1_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 61bp_to_ENST00000378614, ENST00000545675, uc001imk.2, uc009xje.2, uc010qbt.1_5end |
EntrezGene: | SEPHS1 |
HGNC: | 19685 |
UniProt: | Q5T5U9D6PSQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.08e-12 | 253 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.30e-24 | 235 |
disease of cellular proliferation | 2.17e-22 | 239 |
cell type cancer | 3.22e-16 | 143 |
carcinoma | 1.60e-12 | 106 |
organ system cancer | 1.74e-07 | 137 |
disease of anatomical entity | 9.30e-07 | 39 |