FFCP PHASE1:Hg19::chr11:18747734..18747737,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283284 | |EntrezGene=283284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26750 | |HGNC=26750 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000504981_5end | |association_with_transcript=-6bp_to_ENST00000504981_5end | ||
|cluster_id=chr11:18747734..18747737,- | |||
|coexpression_cluster_id=C70 | |||
|description=CAGE_peak_1_at_IGSF22_5end | |description=CAGE_peak_1_at_IGSF22_5end | ||
|id=chr11:18747734..18747737,- | |id=chr11:18747734..18747737,- | ||
|ontology_enrichment_celltype=CL:0000242!2.79e-23!2;CL:0000188!1.69e-11!9;CL:0000312!6.80e-10!5;CL:0000240!2.17e-08!6;CL:0000311!2.17e-08!6;CL:0000079!2.17e-08!6;CL:0000237!2.17e-08!6;CL:0000036!2.17e-08!6;CL:0000357!2.17e-08!6;CL:0000114!2.17e-08!6;CL:0002575!7.20e-07!2 | |ontology_enrichment_celltype=CL:0000242!2.79e-23!2;CL:0000188!1.69e-11!9;CL:0000312!6.80e-10!5;CL:0000240!2.17e-08!6;CL:0000311!2.17e-08!6;CL:0000079!2.17e-08!6;CL:0000237!2.17e-08!6;CL:0000036!2.17e-08!6;CL:0000357!2.17e-08!6;CL:0000114!2.17e-08!6;CL:0002575!7.20e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000123;4.21e-21;2!CL:0000242;4.21e-21;2!CL:0000312;2.86e-09;5!CL:0000240;6.13e-08;6!CL:0000311;6.13e-08;6!CL:0000079;6.13e-08;6!CL:0000237;6.13e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.66e-21,2;CL:0000312,2.97e-09,5;CL:0000240,6.34e-08,6;CL:0000311,6.34e-08,6;CL:0000079,6.34e-08,6;CL:0000237,6.34e-08,6;CL:0000036,6.34e-08,6;CL:0000357,6.34e-08,6;CL:0000114,6.34e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0008801;6.62e-41;1!CL:0000357;6.13e-08;6!CL:0000114;6.13e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!5.80e-16!3;UBERON:0001033!5.80e-16!3;UBERON:0010056!5.80e-16!3;UBERON:0001831!7.03e-13!1;UBERON:0001567!7.03e-13!1;UBERON:0008801!7.03e-13!1;UBERON:0002426!9.92e-13!1;UBERON:0003831!9.92e-13!1;UBERON:0003898!9.92e-13!1;UBERON:0004830!9.92e-13!1;UBERON:0001774!9.92e-13!1;UBERON:0003830!9.92e-13!1;UBERON:0005175!9.92e-13!1;UBERON:0003897!9.92e-13!1;UBERON:0001103!9.92e-13!1;UBERON:0010084!9.92e-13!1;UBERON:0007029!1.11e-12!1;UBERON:0002372!3.85e-12!1;UBERON:0001961!3.85e-12!1;UBERON:0001744!3.85e-12!1;UBERON:0001735!3.85e-12!1;UBERON:0002581!4.31e-12!1;UBERON:0002022!4.81e-12!1;UBERON:0001042!1.42e-10!10;UBERON:0009145!1.42e-10!10;UBERON:0000078!3.39e-10!18;UBERON:0006562!1.16e-09!11;UBERON:0000166!9.11e-09!21;UBERON:0001003!8.82e-08!14;UBERON:0007376!8.82e-08!14;UBERON:0007383!8.82e-08!14;UBERON:0001829!4.56e-07!2;UBERON:0004089!4.56e-07!2;UBERON:0001630!5.41e-07!2;UBERON:0005090!5.41e-07!2;UBERON:0000341!8.06e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;6.62e-41;1!UBERON:0001567;6.62e-41;1!UBERON:0002426;2.21e-40;1!UBERON:0003831;2.21e-40;1!UBERON:0003898;2.21e-40;1!UBERON:0004830;2.21e-40;1!UBERON:0003830;2.21e-40;1!UBERON:0005175;2.21e-40;1!UBERON:0001774;2.21e-40;1!UBERON:0001103;2.21e-40;1!UBERON:0007029;3.30e-40;1!UBERON:0001829;3.11e-21;2!UBERON:0004089;3.11e-21;2!UBERON:0005090;5.70e-21;2!UBERON:0001630;5.70e-21;2!UBERON:0001003;1.46e-11;15!UBERON:0007376;1.46e-11;15!UBERON:0000014;3.79e-11;4!UBERON:0001134;6.29e-11;16!UBERON:0002036;6.29e-11;16!UBERON:0001044;5.54e-08;6!UBERON:0003293;5.54e-08;6!UBERON:0003294;5.54e-08;6!UBERON:0010047;5.54e-08;6!UBERON:0003408;5.54e-08;6!UBERON:0000167;5.54e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,6.62e-41,1;UBERON:0001567,6.62e-41,1;UBERON:0008801,6.62e-41,1;UBERON:0002426,2.21e-40,1;UBERON:0003831,2.21e-40,1;UBERON:0003898,2.21e-40,1;UBERON:0004830,2.21e-40,1;UBERON:0003830,2.21e-40,1;UBERON:0005175,2.21e-40,1;UBERON:0001774,2.21e-40,1;UBERON:0001103,2.21e-40,1;UBERON:0010084,2.21e-40,1;UBERON:0007029,3.30e-40,1;UBERON:0001829,3.11e-21,2;UBERON:0004089,3.11e-21,2;UBERON:0005090,5.70e-21,2;UBERON:0001630,5.70e-21,2;UBERON:0001003,1.50e-11,15;UBERON:0007376,1.50e-11,15;UBERON:0007383,1.50e-11,15;UBERON:0000014,3.79e-11,4;UBERON:0001044,5.54e-08,6;UBERON:0003293,5.54e-08,6;UBERON:0003294,5.54e-08,6;UBERON:0010047,5.54e-08,6;UBERON:0000167,5.54e-08,6 | |||
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|short_description=p1@IGSF22 | |short_description=p1@IGSF22 | ||
}} | }} |
Latest revision as of 03:51, 17 September 2015
Short description: | p1@IGSF22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGSF22_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | -6bp_to_ENST00000504981_5end |
EntrezGene: | IGSF22 |
HGNC: | 26750 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.66e-21 | 2 |
keratinocyte | 2.97e-09 | 5 |
stratified squamous epithelial cell | 6.34e-08 | 6 |
keratin accumulating cell | 6.34e-08 | 6 |
stratified epithelial cell | 6.34e-08 | 6 |
keratinizing barrier epithelial cell | 6.34e-08 | 6 |
epithelial fate stem cell | 6.34e-08 | 6 |
stratified epithelial stem cell | 6.34e-08 | 6 |
surface ectodermal cell | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 6.62e-41 | 1 |
cheek | 6.62e-41 | 1 |
parotid gland primordium | 6.62e-41 | 1 |
chest muscle | 2.21e-40 | 1 |
respiratory system muscle | 2.21e-40 | 1 |
skeletal muscle of trunk | 2.21e-40 | 1 |
respiratory system skeletal muscle | 2.21e-40 | 1 |
thoracic segment muscle | 2.21e-40 | 1 |
chest organ | 2.21e-40 | 1 |
muscle of trunk | 2.21e-40 | 1 |
diaphragm | 2.21e-40 | 1 |
future diaphragm | 2.21e-40 | 1 |
surface | 3.30e-40 | 1 |
major salivary gland | 3.11e-21 | 2 |
midface | 3.11e-21 | 2 |
muscle structure | 5.70e-21 | 2 |
muscle organ | 5.70e-21 | 2 |
skin epidermis | 1.50e-11 | 15 |
outer epithelium | 1.50e-11 | 15 |
enveloping layer of ectoderm | 1.50e-11 | 15 |
zone of skin | 3.79e-11 | 4 |
saliva-secreting gland | 5.54e-08 | 6 |
gland of oral region | 5.54e-08 | 6 |
gland of foregut | 5.54e-08 | 6 |
oral gland | 5.54e-08 | 6 |
oral cavity | 5.54e-08 | 6 |