FFCP PHASE1:Hg19::chr20:56284940..56284953,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:56284940..56284953,- to FFCP PHASE1:Hg19::chr20:56284940..56284953,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56937 | |EntrezGene=56937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14107 | |HGNC=14107 | ||
|TSSclassifier=strong | |||
|UniProt=Q969W9 | |UniProt=Q969W9 | ||
|association_with_transcript=4bp_to_ENST00000341744_5end | |||
|cluster_id=chr20:56284940..56284953,- | |||
|coexpression_cluster_id=C4053 | |||
|description=CAGE_peak_5_at_PMEPA1_5end | |||
|id=chr20:56284940..56284953,- | |||
|ontology_enrichment_celltype=CL:0002368!3.05e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000128;7.78e-10;7!CL:0000126;7.78e-10;7!CL:0000127;7.78e-10;7!CL:0000244;2.42e-08;4!CL:0000731;2.42e-08;4!CL:1000507;3.12e-07;10!CL:1000494;3.12e-07;10!CL:1000449;3.98e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,5.96e-10,7;CL:0000126,5.96e-10,7;CL:0000127,5.96e-10,7;CL:0002453,5.96e-10,7;CL:0000244,2.47e-08,4;CL:0000731,2.47e-08,4;CL:1000507,4.03e-07,10;CL:1000494,4.03e-07,10;CL:1000449,4.14e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;7.22e-10;5!UBERON:0005910;4.34e-08;6!UBERON:0006554;8.12e-08;30!UBERON:0001008;8.12e-08;30!UBERON:0004211;3.12e-07;10!UBERON:0009773;3.12e-07;10!UBERON:0001231;3.12e-07;10!UBERON:0004810;3.12e-07;10!UBERON:0006555;3.98e-07;15!UBERON:0004819;3.98e-07;15!UBERON:0001285;3.98e-07;15!UBERON:0007684;3.98e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,7.10e-10,5;UBERON:0005910,4.28e-08,6;UBERON:0004810,4.03e-07,10;UBERON:0004211,4.14e-07,15;UBERON:0009773,4.14e-07,15;UBERON:0001231,4.14e-07,15;UBERON:0001285,4.14e-07,15;UBERON:0007684,4.14e-07,15;UBERON:0004208,4.14e-07,15;UBERON:0006554,5.71e-07,47;UBERON:0001008,9.95e-07,48 | |||
|phase1_expression=0.726713517082227,0,0.422863212287913,0,0.893922188854576,0,0,0,0,2.45733936501509,2.79120467188971,0.873765488520689,1.84636884759917,0.123766352960047,0,0,0,0,0,1.60057375499824,1.22400414746552,2.19418305034661,1.71741592278634,2.18999080116615,3.38965126905968,0,0,0,0.393364276848904,0.767658796194425,0.309632246632152,0.919421224478927,1.50602959389125,0.369754010166788,0,0,0,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0,0.28769239232215,0.512321413058201,0,0,0.645484683583826,0,0.376484679085209,0.545812300115692,0.224723484445085,0.306083892370903,0.641858054152187,0,0,0.398927315243264,0,0,0,0.622822248995575,0,0.521482918420201,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,1.1384259382189,0.587237189370939,1.14681968437569,0,2.24203425192614,0,0.196709770113833,0.393010762749165,1.23360899399706,0,0.32592226663359,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0.766440987203842,0.34362744548263,0,0,0,0,0,0,0,0,0,1.20964045934839,1.87208137048455,1.44824403882799,0,0,0,0.361439152384566,0.50133791063589,0.869079113764942,10.3387173116643,12.6525066278685,3.30871860074237,5.5432349365641,4.30390449896318,0.654895377488563,0,0,0,0,0,4.5313218618015,2.85997455390064,2.22874500797739,0.198762407366705,0,0.694281003215189,1.69592382577203,0,0.825354125820202,0,0,0,0,0,0,0,0,1.62028389576352,0,0,0,0,0,0.916008719652036,0,0,0,0.496971951695318,0.25326102332916,0,0,0,0,1.06748995729705,4.19334832309172,0.311211035399766,0,0,0.151357427644931,5.76175924479999,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,1.18800285728205,1.97813543422845,0,0,0,0,0.277064115484183,1.31693286264251,0,1.35214253015937,0.113432183160021,0.179389635688862,0.427114777637135,0,0,0.103052529238439,0,0.744467425326359,0.168776332241266,0.194874010322397,0,0.0920498986422993,0.161646056818812,0.355009592516614,0.10075209822764,0.339121184620975,1.54608682530637,0.818238361772504,1.14721838155602,0.121973706129595,0,0,0.518305275076852,0.252320850875628,0.72995471815166,0,0.643240938192885,2.76269842704961,0.464367928031979,0,0.709840800239063,0.168584690078102,0,0.441175890929576,0.217879444092406,0.237270619111097,1.07865046528132,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0,0.514703430895577,3.07300799144152,0,0.402115889646523,0.185176890317059,0,0,0,1.73895607462615,0.469634776943287,0,0,0,0.790204397959275,3.43394464837949,0,0.234004265139238,0,0,2.85569617938061,0.708875486211932,0.358234090811393,0.290633938513962,0.766765358330422,0.492663237895943,0.088048434013226,0.207328115540772,0.144119953416961,0,0.063497894292169,1.14596527667483,0,0,0.102827492703324,0,0,0,0.43596006883328,0.1466765716419,1.68053230485111,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0.871533458600294,0.299918973546171,0,0,0,0.239624855491583,0,0,0.723906533337896,0.410952645100767,0.716243852959582,0,1.77327684181734,0.646882724578552,0.641715181398742,2.03275699377971,0,0,0.502548796003046,0.637938751653163,0.749007023947182,0,0,0,0,0,0,0,0,0.117141414992713,0,4.5481500811197,1.03473071292505,1.32845119707087,1.47495334833363,0,0,2.40200396667599,0.82707210449155,0.647142602455851,1.06727557803444,0,6.65741758041988,0.604780586659361,0.248107807818777,0.153461973288062,0.280660094433074,0.256278298511402,0,0.64341568457443,0,0.154209693802656,0.177561725313127,0,0,0.232420756919918,0,13.8349464509267,0.460404944679482,0.114814448164607,0,0,2.70719767744447,2.31046011313244,3.13739907670742,4.38417673959782,6.22754610467967,0,0,0.215915916102139,1.54227252690289,0.270946437543853,1.00337954770971,0.509752546090077,0,1.56712328305525,0,0,0,0,0.325378394664303,0,0.183138929636687,0.330037999682352,4.01985876597321,1.30012049207304,0,0.580024309752732,0,0.15350367472613,0.137836572484531,0,0,0.596586391912706,2.22580089116843,2.97512847649761,6.1500821556834,1.27612712494584,0.910420027699949,0,0,0,0,0,1.73986598415015,2.22389062924704,0.286249773483982,0.372158369359667,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,1.10273068709225,0.66343897524122,0,0,0,0.405820753925408,0.6196469961995,0,0,0,0.7133421029625,0,0,0,0,0,1.15466535270614,0.670302275535787,1.08890984861323,0.0941438007767792,8.6101074534246,11.7930032967338,7.09488245658681,11.256446610141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,6.81926752335391,0.47748896947538,0.890894042497916,0,0,0,0.333926115068718,0,0.211125408127993,1.19548792950642,0.552567831062295,0.251932747854276,1.63629892003448,0,0.311039587661807,6.11104787801823,0.179021174675609,0,0.394573622547734,0,0,0,0.185536196323703,0,1.04171104434093,1.22443999994674,0,0.682760689712998,0.762760950878299,1.89110145414349,0,0,0,0.885741385813839,1.4471572635049,0,0,0,1.31631238292384,0,0,2.6932590476329,0.455768223388005,0,0,0,0.31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| 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| ||
|short_description=p5@PMEPA1 | |||
}} | }} |
Latest revision as of 04:41, 17 September 2015
Short description: | p5@PMEPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PMEPA1_5end |
Coexpression cluster: | C4053_papillotubular_Urothelial_mature_Chondrocyte_Prostate_Small_bile |
Association with transcript: | 4bp_to_ENST00000341744_5end |
EntrezGene: | PMEPA1 |
HGNC: | 14107 |
UniProt: | Q969W9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 5.96e-10 | 7 |
macroglial cell | 5.96e-10 | 7 |
astrocyte | 5.96e-10 | 7 |
oligodendrocyte precursor cell | 5.96e-10 | 7 |
transitional epithelial cell | 2.47e-08 | 4 |
urothelial cell | 2.47e-08 | 4 |
kidney tubule cell | 4.03e-07 | 10 |
nephron tubule epithelial cell | 4.03e-07 | 10 |
epithelial cell of nephron | 4.14e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
urothelium | 7.10e-10 | 5 |
transitional epithelium | 4.28e-08 | 6 |
nephron tubule epithelium | 4.03e-07 | 10 |
nephron epithelium | 4.14e-07 | 15 |
renal tubule | 4.14e-07 | 15 |
nephron tubule | 4.14e-07 | 15 |
nephron | 4.14e-07 | 15 |
uriniferous tubule | 4.14e-07 | 15 |
nephrogenic mesenchyme | 4.14e-07 | 15 |
urinary system structure | 5.71e-07 | 47 |
renal system | 9.95e-07 | 48 |