FFCP PHASE1:Hg19::chr11:1946132..1946150,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:1946132..1946150,+
|short_description=p8@TNNT3
|description=CAGE_peak_8_at_TNNT3_5end
|association_with_transcript=0bp_to_ENST00000492075_5end
|EntrezGen...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7140 | |EntrezGene=7140 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11950 | |HGNC=11950 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000492075_5end | |||
|cluster_id=chr11:1946132..1946150,+ | |||
|coexpression_cluster_id=C3127 | |||
|description=CAGE_peak_8_at_TNNT3_5end | |||
|id=chr11:1946132..1946150,+ | |||
|ontology_enrichment_celltype=CL:0000349!3.08e-11!3;CL:0002541!3.08e-11!3;CL:0002577!3.08e-11!3;CL:0002536!2.02e-07!2;CL:0002537!5.58e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.15e-33;19!CL:0002577;3.16e-25;3!CL:0002541;4.75e-25;3!CL:0002537;1.19e-15;5!CL:1001319;3.67e-09;1!CL:1000600;3.67e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,9.87e-34,19;CL:0002541,3.29e-25,3;CL:0002577,3.29e-25,3;CL:0002537,1.20e-15,5;CL:1001319,3.00e-09,1;CL:1000600,3.00e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.76e-09;1!UBERON:0003124;3.67e-09;1 | |||
|ontology_enrichment_disease=DOID:1749!4.47e-10!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.22e-33!14;UBERON:0000158!4.22e-33!14;UBERON:0003124!1.12e-23!7;UBERON:0000478!2.35e-21!24;UBERON:0004923!5.68e-20!57;UBERON:0000974!2.32e-18!10;UBERON:0001987!3.52e-14!4;UBERON:0004340!3.52e-14!4;UBERON:0003343!2.32e-12!4;UBERON:0004785!2.32e-12!4;UBERON:0000305!4.01e-12!7;UBERON:0000476!3.08e-11!3;UBERON:0000920!3.08e-11!3;UBERON:0004871!1.48e-10!8;UBERON:0003729!6.64e-10!5;UBERON:0000344!1.21e-08!12;UBERON:0001255!1.20e-07!2;UBERON:0001556!1.20e-07!2;UBERON:0000341!1.29e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.99e-39;24!UBERON:0001987;1.30e-32;4!UBERON:0005631;3.28e-29;10!UBERON:0000158;3.28e-29;10!UBERON:0003124;4.75e-25;3!UBERON:0000920;4.75e-25;3!UBERON:0000305;2.49e-11;7!UBERON:0004645;3.67e-09;1!UBERON:0002426;3.67e-09;1!UBERON:0003831;3.67e-09;1!UBERON:0003898;3.67e-09;1!UBERON:0004830;3.67e-09;1!UBERON:0003830;3.67e-09;1!UBERON:0005175;3.67e-09;1!UBERON:0001774;3.67e-09;1!UBERON:0001103;3.67e-09;1!UBERON:0001256;3.67e-09;1!UBERON:0001259;3.67e-09;1!UBERON:0000077;2.65e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.27e-56,14;UBERON:0000158,1.27e-56,14;UBERON:0003124,7.57e-56,7;UBERON:0000478,3.11e-39,24;UBERON:0001987,1.96e-32,4;UBERON:0004340,1.96e-32,4;UBERON:0000920,3.29e-25,3;UBERON:0004923,1.42e-15,66;UBERON:0000305,2.49e-11,7;UBERON:0004871,5.64e-10,8;UBERON:0004645,3.00e-09,1;UBERON:0001256,3.00e-09,1;UBERON:0001259,3.00e-09,1;UBERON:0002426,3.25e-09,1;UBERON:0003831,3.25e-09,1;UBERON:0003898,3.25e-09,1;UBERON:0004830,3.25e-09,1;UBERON:0003830,3.25e-09,1;UBERON:0005175,3.25e-09,1;UBERON:0001774,3.25e-09,1;UBERON:0001103,3.25e-09,1;UBERON:0010084,3.25e-09,1;UBERON:0000077,9.02e-07,29 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,1.23852898652861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.66880657181771,4.99306318531491,16.0266855464731,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9958804774252,47.5143489332222,16.2795172112593,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,22.9680835006982,1.74035427463538,12.2597998484286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,2.03382666702479,0,0,0,0,0,0,3.19695375331408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0.11796972334774,0.366857197043358,0.115525666150338,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0.227662191351298,1.06442844195167,0,0,0,0,0,0,0.235479278551542,0,16.8163297988273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,0,0,0,1.47088993052343,0,0,0,0,0,0,0,0,10.1775745005225,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,1.66645102024618,0.0645889098360061,0.186224142887574,0,0,0,0,1.36893320434112,0,0,1.33064142618405,1.62806537221949,0,0,0,4.69281884806909,0,0,0,0,0 | |phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,1.23852898652861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.66880657181771,4.99306318531491,16.0266855464731,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9958804774252,47.5143489332222,16.2795172112593,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,22.9680835006982,1.74035427463538,12.2597998484286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,2.03382666702479,0,0,0,0,0,0,3.19695375331408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0.11796972334774,0.366857197043358,0.115525666150338,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0.227662191351298,1.06442844195167,0,0,0,0,0,0,0.235479278551542,0,16.8163297988273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,0,0,0,1.47088993052343,0,0,0,0,0,0,0,0,10.1775745005225,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,1.66645102024618,0.0645889098360061,0.186224142887574,0,0,0,0,1.36893320434112,0,0,1.33064142618405,1.62806537221949,0,0,0,4.69281884806909,0,0,0,0,0 | ||
|short_description=p8@TNNT3 | |||
}} | }} |
Latest revision as of 04:50, 17 September 2015
Short description: | p8@TNNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TNNT3_5end |
Coexpression cluster: | C3127_amniotic_chorionic_rectal_Placental_squamous_umbilical_pancreatic |
Association with transcript: | 0bp_to_ENST00000492075_5end |
EntrezGene: | TNNT3 |
HGNC: | 11950 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 9.87e-34 | 19 |
chorionic membrane mesenchymal stem cell | 3.29e-25 | 3 |
placental epithelial cell | 3.29e-25 | 3 |
amnion mesenchymal stem cell | 1.20e-15 | 5 |
bladder cell | 3.00e-09 | 1 |
lower urinary tract cell | 3.00e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.27e-56 | 14 |
membranous layer | 1.27e-56 | 14 |
chorion | 7.57e-56 | 7 |
extraembryonic structure | 3.11e-39 | 24 |
placenta | 1.96e-32 | 4 |
allantois | 1.96e-32 | 4 |
egg chorion | 3.29e-25 | 3 |
organ component layer | 1.42e-15 | 66 |
amnion | 2.49e-11 | 7 |
somatic layer of lateral plate mesoderm | 5.64e-10 | 8 |
urinary bladder urothelium | 3.00e-09 | 1 |
wall of urinary bladder | 3.00e-09 | 1 |
mucosa of urinary bladder | 3.00e-09 | 1 |
chest muscle | 3.25e-09 | 1 |
respiratory system muscle | 3.25e-09 | 1 |
skeletal muscle of trunk | 3.25e-09 | 1 |
respiratory system skeletal muscle | 3.25e-09 | 1 |
thoracic segment muscle | 3.25e-09 | 1 |
chest organ | 3.25e-09 | 1 |
muscle of trunk | 3.25e-09 | 1 |
diaphragm | 3.25e-09 | 1 |
future diaphragm | 3.25e-09 | 1 |
mixed endoderm/mesoderm-derived structure | 9.02e-07 | 29 |