FFCP PHASE1:Hg19::chr13:34392227..34392254,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:34392227..34392254,+
|short_description=p2@RFC3
|description=CAGE_peak_2_at_RFC3_5end
|association_with_transcript=21bp_to_ENST00000434425,NM_002915,NM_18...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5983 | |EntrezGene=5983 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9971 | |HGNC=9971 | ||
|TSSclassifier=strong | |||
|UniProt=C9JU95,P40938 | |UniProt=C9JU95,P40938 | ||
|association_with_transcript=21bp_to_ENST00000434425,NM_002915,NM_181558,uc001uuz.2,uc001uva.2,uc010ted.1_5end | |||
|cluster_id=chr13:34392227..34392254,+ | |||
|description=CAGE_peak_2_at_RFC3_5end | |||
|id=chr13:34392227..34392254,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.88e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.81e-07,24;CL:0000826,5.81e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.88e-37!235;DOID:14566!5.70e-36!239;DOID:0050687!2.67e-20!143;DOID:2531!2.81e-17!51;DOID:0060083!2.81e-17!51;DOID:0050686!1.73e-16!137;DOID:305!1.27e-15!106;DOID:1240!2.19e-13!39;DOID:8692!3.44e-09!31;DOID:3095!9.74e-08!22;DOID:2994!9.74e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:1240;7.44e-12;39!DOID:2531;1.26e-11;51!DOID:0060083;1.26e-11;51!DOID:8692;1.95e-09;31!DOID:3095;1.99e-08;22!DOID:2994;1.99e-08;22!DOID:0060058;9.57e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.28e-37,235;DOID:14566,4.42e-36,239;DOID:0050687,7.48e-20,143;DOID:2531,2.49e-18,51;DOID:0060083,2.49e-18,51;DOID:0050686,2.47e-16,137;DOID:305,1.74e-15,106;DOID:1240,3.10e-14,39;DOID:8692,8.42e-10,31;DOID:3095,2.72e-08,22;DOID:2994,2.72e-08,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001557,9.50e-07,19 | |||
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| ||
|short_description=p2@RFC3 | |||
}} | }} |
Latest revision as of 04:52, 17 September 2015
Short description: | p2@RFC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RFC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000434425, NM_002915, NM_181558, uc001uuz.2, uc001uva.2, uc010ted.1_5end |
EntrezGene: | RFC3 |
HGNC: | 9971 |
UniProt: | C9JU95P40938 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.81e-07 | 24 |
pro-B cell | 5.81e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
upper respiratory tract | 9.50e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.28e-37 | 235 |
disease of cellular proliferation | 4.42e-36 | 239 |
cell type cancer | 7.48e-20 | 143 |
hematologic cancer | 2.49e-18 | 51 |
immune system cancer | 2.49e-18 | 51 |
organ system cancer | 2.47e-16 | 137 |
carcinoma | 1.74e-15 | 106 |
leukemia | 3.10e-14 | 39 |
myeloid leukemia | 8.42e-10 | 31 |
germ cell and embryonal cancer | 2.72e-08 | 22 |
germ cell cancer | 2.72e-08 | 22 |