FFCP PHASE1:Hg19::chr16:57980404..57980415,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:57980404..57980415,-
|short_description=p@chr16:57980404..57980415,-
|description=CAGE_peak_at_chr16:57980404..57980415,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:57980404..57980415,- | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_at_chr16:57980404..57980415,- | |||
|id=chr16:57980404..57980415,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.19e-53;5!CL:0002321;1.04e-18;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,2.86e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:169!4.93e-14!6;DOID:171!1.27e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:169;9.76e-45;6!DOID:171;2.08e-27;10!DOID:3095;3.77e-13;22!DOID:2994;3.77e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,9.76e-45,6;DOID:171,2.08e-27,10;DOID:3095,3.77e-13,22;DOID:2994,3.77e-13,22 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000013;2.19e-53;5!UBERON:0002410;2.19e-53;5!UBERON:0000010;2.66e-30;8!UBERON:0001052;1.03e-17;4!UBERON:0004907;1.83e-14;5!UBERON:0000059;2.63e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.19e-53,5;UBERON:0002410,2.19e-53,5;UBERON:0000010,2.66e-30,8;UBERON:0001052,1.03e-17,4;UBERON:0004907,1.83e-14,5;UBERON:0000059,2.63e-07,11 | |||
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|short_description=p@chr16:57980404..57980415,- | |||
}} | }} |
Latest revision as of 05:11, 17 September 2015
Short description: | p@chr16:57980404..57980415, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:57980404..57980415, - |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 2.86e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.19e-53 | 5 |
autonomic nervous system | 2.19e-53 | 5 |
peripheral nervous system | 2.66e-30 | 8 |
rectum | 1.03e-17 | 4 |
lower digestive tract | 1.83e-14 | 5 |
large intestine | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 9.76e-45 | 6 |
neuroectodermal tumor | 2.08e-27 | 10 |
germ cell and embryonal cancer | 3.77e-13 | 22 |
germ cell cancer | 3.77e-13 | 22 |