FFCP PHASE1:Hg19::chr3:186739722..186739731,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6480 | |EntrezGene=6480 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10860 | |HGNC=10860 | ||
|TSSclassifier=strong | |||
|UniProt=P15907 | |UniProt=P15907 | ||
|association_with_transcript=57bp_to_NM_003032,uc003frd.2_5end | |association_with_transcript=57bp_to_NM_003032,uc003frd.2_5end | ||
|cluster_id=chr3:186739722..186739731,+ | |||
|coexpression_cluster_id=C995 | |coexpression_cluster_id=C995 | ||
|description=CAGE_peak_13_at_ST6GAL1_5end | |description=CAGE_peak_13_at_ST6GAL1_5end | ||
|id=chr3:186739722..186739731,+ | |id=chr3:186739722..186739731,+ | ||
|ontology_enrichment_celltype=CL:0000945!3.57e-37!24;CL:0000826!3.57e-37!24;CL:0000236!2.06e-21!14;CL:0000542!8.79e-15!53;CL:0000051!8.79e-15!53;CL:0000838!1.43e-13!52 | |ontology_enrichment_celltype=CL:0000945!3.57e-37!24;CL:0000826!3.57e-37!24;CL:0000236!2.06e-21!14;CL:0000542!8.79e-15!53;CL:0000051!8.79e-15!53;CL:0000838!1.43e-13!52 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.93e-94;24!CL:0000236;4.93e-43;13!CL:0000542;8.87e-29;53!CL:0000946;5.59e-09;1!CL:0000786;5.59e-09;1!CL:0000785;1.10e-08;1!CL:0000819;1.10e-08;1!CL:0002087;4.22e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.87e-94,24;CL:0000826,2.87e-94,24;CL:0000236,1.27e-49,14;CL:0000542,8.09e-46,53;CL:0000051,8.09e-46,53;CL:0000838,1.01e-41,52;CL:0002087,5.55e-19,115;CL:0000785,5.56e-16,2;CL:0000955,5.56e-16,2;CL:0000818,5.56e-16,2;CL:0000954,5.56e-16,2;CL:0000816,5.56e-16,2;CL:0002031,5.73e-16,120;CL:0000738,1.64e-15,136;CL:0002032,1.49e-12,161;CL:0000837,1.49e-12,161;CL:0000037,7.00e-12,168;CL:0000988,4.28e-11,177;CL:0000817,5.87e-11,3;CL:0000946,5.59e-09,1;CL:0000786,5.59e-09,1;CL:0000980,5.59e-09,1;CL:0000819,1.02e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000051;8.87e-29;53!CL:0000954;5.98e-16;2!UBERON:0004872;1.21e-09;7!UBERON:0008801;2.95e-08;1 | |||
|ontology_enrichment_disease=DOID:0060058!4.23e-07!10 | |ontology_enrichment_disease=DOID:0060058!4.23e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;6.06e-12;10!DOID:0060073;1.10e-08;1!DOID:8675;1.10e-08;1!DOID:12603;1.10e-08;1!DOID:630;1.71e-08;1!DOID:0050177;1.71e-08;1!DOID:0050427;1.71e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.81e-12,10;DOID:12603,8.78e-09,1;DOID:0060073,1.02e-08,1;DOID:8675,1.02e-08,1;DOID:630,1.84e-08,1;DOID:0050177,1.84e-08,1;DOID:0050427,1.84e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.60e-30!115;UBERON:0001049!8.17e-14!57;UBERON:0005068!8.17e-14!57;UBERON:0006241!8.17e-14!57;UBERON:0007135!8.17e-14!57;UBERON:0002780!2.02e-11!41;UBERON:0001890!2.02e-11!41;UBERON:0006240!2.02e-11!41;UBERON:0003080!4.83e-11!42;UBERON:0002616!1.09e-10!59;UBERON:0001893!8.26e-10!34;UBERON:0001869!3.95e-09!32;UBERON:0000955!4.83e-09!69;UBERON:0006238!4.83e-09!69;UBERON:0002791!8.18e-09!33;UBERON:0005743!1.85e-08!86;UBERON:0001017!2.22e-08!82;UBERON:0002020!2.44e-08!34;UBERON:0003528!2.44e-08!34;UBERON:0003075!7.76e-08!86;UBERON:0007284!7.76e-08!86;UBERON:0002346!3.16e-07!90;UBERON:0000073!4.34e-07!94;UBERON:0001016!4.34e-07!94;UBERON:0003056!4.77e-07!61;UBERON:0001950!6.75e-07!20;UBERON:0002106!7.62e-07!3;UBERON:0004854!7.62e-07!3;UBERON:0009034!7.62e-07!3;UBERON:0002095!7.62e-07!3;UBERON:0004782!7.62e-07!3;UBERON:0003281!7.62e-07!3;UBERON:0009664!7.62e-07!3;UBERON:0002296!7.62e-07!3;UBERON:0005602!7.62e-07!3;UBERON:0001179!7.62e-07!3;UBERON:0006293!7.62e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!5.60e-30!115;UBERON:0001049!8.17e-14!57;UBERON:0005068!8.17e-14!57;UBERON:0006241!8.17e-14!57;UBERON:0007135!8.17e-14!57;UBERON:0002780!2.02e-11!41;UBERON:0001890!2.02e-11!41;UBERON:0006240!2.02e-11!41;UBERON:0003080!4.83e-11!42;UBERON:0002616!1.09e-10!59;UBERON:0001893!8.26e-10!34;UBERON:0001869!3.95e-09!32;UBERON:0000955!4.83e-09!69;UBERON:0006238!4.83e-09!69;UBERON:0002791!8.18e-09!33;UBERON:0005743!1.85e-08!86;UBERON:0001017!2.22e-08!82;UBERON:0002020!2.44e-08!34;UBERON:0003528!2.44e-08!34;UBERON:0003075!7.76e-08!86;UBERON:0007284!7.76e-08!86;UBERON:0002346!3.16e-07!90;UBERON:0000073!4.34e-07!94;UBERON:0001016!4.34e-07!94;UBERON:0003056!4.77e-07!61;UBERON:0001950!6.75e-07!20;UBERON:0002106!7.62e-07!3;UBERON:0004854!7.62e-07!3;UBERON:0009034!7.62e-07!3;UBERON:0002095!7.62e-07!3;UBERON:0004782!7.62e-07!3;UBERON:0003281!7.62e-07!3;UBERON:0009664!7.62e-07!3;UBERON:0002296!7.62e-07!3;UBERON:0005602!7.62e-07!3;UBERON:0001179!7.62e-07!3;UBERON:0006293!7.62e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;3.47e-10;3!UBERON:0002372;2.95e-08;1!UBERON:0001831;2.95e-08;1!UBERON:0001961;2.95e-08;1!UBERON:0001744;2.95e-08;1!UBERON:0001042;2.95e-08;1!UBERON:0001567;2.95e-08;1!UBERON:0001735;2.95e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.01e-10,3;UBERON:0004854,3.01e-10,3;UBERON:0009034,3.01e-10,3;UBERON:0002095,3.01e-10,3;UBERON:0004782,3.01e-10,3;UBERON:0003281,3.01e-10,3;UBERON:0009664,3.01e-10,3;UBERON:0002296,3.01e-10,3;UBERON:0005602,3.01e-10,3;UBERON:0001179,3.01e-10,3;UBERON:0006293,3.01e-10,3;UBERON:0002372,2.64e-08,1;UBERON:0001961,2.64e-08,1;UBERON:0001744,2.64e-08,1;UBERON:0001735,2.64e-08,1;UBERON:0001831,3.79e-08,1;UBERON:0001567,3.79e-08,1;UBERON:0008801,3.79e-08,1 | |||
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|short_description=p13@ST6GAL1 | |short_description=p13@ST6GAL1 | ||
}} | }} |
Latest revision as of 06:04, 17 September 2015
Short description: | p13@ST6GAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ST6GAL1_5end |
Coexpression cluster: | C995_B_plasma_lymphoma_xeroderma_acute_Burkitt_b |
Association with transcript: | 57bp_to_NM_003032, uc003frd.2_5end |
EntrezGene: | ST6GAL1 |
HGNC: | 10860 |
UniProt: | P15907 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.87e-94 | 24 |
pro-B cell | 2.87e-94 | 24 |
B cell | 1.27e-49 | 14 |
lymphocyte | 8.09e-46 | 53 |
common lymphoid progenitor | 8.09e-46 | 53 |
lymphoid lineage restricted progenitor cell | 1.01e-41 | 52 |
nongranular leukocyte | 5.55e-19 | 115 |
mature B cell | 5.56e-16 | 2 |
pre-B-II cell | 5.56e-16 | 2 |
transitional stage B cell | 5.56e-16 | 2 |
small pre-B-II cell | 5.56e-16 | 2 |
immature B cell | 5.56e-16 | 2 |
hematopoietic lineage restricted progenitor cell | 5.73e-16 | 120 |
leukocyte | 1.64e-15 | 136 |
hematopoietic oligopotent progenitor cell | 1.49e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.49e-12 | 161 |
hematopoietic stem cell | 7.00e-12 | 168 |
hematopoietic cell | 4.28e-11 | 177 |
precursor B cell | 5.87e-11 | 3 |
antibody secreting cell | 5.59e-09 | 1 |
plasma cell | 5.59e-09 | 1 |
plasmablast | 5.59e-09 | 1 |
B-1 B cell | 1.02e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.01e-10 | 3 |
gastrointestinal system mesentery | 3.01e-10 | 3 |
stomach region | 3.01e-10 | 3 |
mesentery | 3.01e-10 | 3 |
gastrointestinal system serosa | 3.01e-10 | 3 |
mesentery of stomach | 3.01e-10 | 3 |
gut mesentery | 3.01e-10 | 3 |
dorsal mesentery | 3.01e-10 | 3 |
dorsal mesogastrium | 3.01e-10 | 3 |
peritoneal cavity | 3.01e-10 | 3 |
spleen primordium | 3.01e-10 | 3 |
tonsil | 2.64e-08 | 1 |
mucosa-associated lymphoid tissue | 2.64e-08 | 1 |
lymphoid tissue | 2.64e-08 | 1 |
tonsillar ring | 2.64e-08 | 1 |
parotid gland | 3.79e-08 | 1 |
cheek | 3.79e-08 | 1 |
parotid gland primordium | 3.79e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.81e-12 | 10 |
acute leukemia | 8.78e-09 | 1 |
lymphatic system cancer | 1.02e-08 | 1 |
lymphosarcoma | 1.02e-08 | 1 |
genetic disease | 1.84e-08 | 1 |
monogenic disease | 1.84e-08 | 1 |
xeroderma pigmentosum | 1.84e-08 | 1 |