FFCP PHASE1:Hg19::chr10:13749771..13749780,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55691 | |EntrezGene=55691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25491 | |HGNC=25491 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_ENST00000492155_5end | |association_with_transcript=-14bp_to_ENST00000492155_5end | ||
|cluster_id=chr10:13749771..13749780,- | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_20_at_FRMD4A_5end | |description=CAGE_peak_20_at_FRMD4A_5end | ||
|id=chr10:13749771..13749780,- | |id=chr10:13749771..13749780,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002591;2.70e-40;1!CL:0000945;5.36e-27;24!CL:0000542;2.58e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,2.21e-40,1;CL:0000945,5.55e-27,24;CL:0000826,5.55e-27,24;CL:0000838,7.03e-13,52;CL:0000542,1.19e-12,53;CL:0000051,1.19e-12,53 | |||
|ontology_enrichment_development_v019=CL:0000051;2.58e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!7.75e-12!34;UBERON:0001869!3.18e-11!32;UBERON:0002791!1.31e-10!33;UBERON:0002780!3.29e-09!41;UBERON:0001890!3.29e-09!41;UBERON:0006240!3.29e-09!41;UBERON:0002619!3.53e-09!22;UBERON:0003080!6.60e-09!42;UBERON:0002020!7.36e-09!34;UBERON:0003528!7.36e-09!34;UBERON:0001950!2.51e-08!20;UBERON:0000956!7.61e-08!25;UBERON:0000203!7.61e-08!25;UBERON:0007023!1.41e-07!115;UBERON:0002771!6.15e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;6.30e-21;2!UBERON:0002012;6.30e-21;2!UBERON:0008886;6.30e-21;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,5.70e-21,2;UBERON:0007497,5.70e-21,2;UBERON:0003643,5.70e-21,2;UBERON:0003504,5.70e-21,2;UBERON:0003469,5.70e-21,2;UBERON:0003496,5.70e-21,2;UBERON:0002012,5.70e-21,2;UBERON:0008886,5.70e-21,2;UBERON:0007303,5.70e-21,2;UBERON:0002061,5.70e-21,2;UBERON:0005432,5.70e-21,2;UBERON:0004363,5.70e-21,2;UBERON:0004145,1.83e-14,3;UBERON:0003498,3.22e-09,5;UBERON:0005985,3.22e-09,5;UBERON:0010188,6.78e-08,6;UBERON:0002539,6.78e-08,6;UBERON:0003351,6.78e-08,6;UBERON:0008816,6.78e-08,6 | |||
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| ||
|short_description=p20@FRMD4A | |short_description=p20@FRMD4A | ||
}} | }} |
Latest revision as of 06:37, 17 September 2015
Short description: | p20@FRMD4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_FRMD4A_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -14bp_to_ENST00000492155_5end |
EntrezGene: | FRMD4A |
HGNC: | 25491 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 2.21e-40 | 1 |
lymphocyte of B lineage | 5.55e-27 | 24 |
pro-B cell | 5.55e-27 | 24 |
lymphoid lineage restricted progenitor cell | 7.03e-13 | 52 |
lymphocyte | 1.19e-12 | 53 |
common lymphoid progenitor | 1.19e-12 | 53 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 5.70e-21 | 2 |
developing epithelial placode | 5.70e-21 | 2 |
respiratory system arterial blood vessel | 5.70e-21 | 2 |
respiratory system blood vessel | 5.70e-21 | 2 |
respiratory system artery | 5.70e-21 | 2 |
head blood vessel | 5.70e-21 | 2 |
pulmonary artery | 5.70e-21 | 2 |
pulmonary vascular system | 5.70e-21 | 2 |
pharyngeal vasculature | 5.70e-21 | 2 |
truncus arteriosus | 5.70e-21 | 2 |
aortic sac | 5.70e-21 | 2 |
pharyngeal arch artery | 5.70e-21 | 2 |
outflow tract | 1.83e-14 | 3 |
heart blood vessel | 3.22e-09 | 5 |
coronary vessel | 3.22e-09 | 5 |
protuberance | 6.78e-08 | 6 |
pharyngeal arch | 6.78e-08 | 6 |
pharyngeal epithelium | 6.78e-08 | 6 |
embryonic head | 6.78e-08 | 6 |