FFCP PHASE1:Hg19::chr8:18942386..18942401,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:18942386..18942401,-
|short_description=p22@PSD3
|description=CAGE_peak_22_at_PSD3_5end
|association_with_transcript=-146bp_to_ENST00000521475_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23362 | |EntrezGene=23362 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19093 | |HGNC=19093 | ||
|TSSclassifier=strong | |||
|UniProt=E5RIH3 | |UniProt=E5RIH3 | ||
|association_with_transcript=-146bp_to_ENST00000521475_5end | |||
|cluster_id=chr8:18942386..18942401,- | |||
|coexpression_cluster_id=C1542 | |||
|description=CAGE_peak_22_at_PSD3_5end | |||
|id=chr8:18942386..18942401,- | |||
|ontology_enrichment_celltype=CL:0000057!2.43e-14!75;CL:0000055!1.68e-12!180;CL:0002620!2.70e-12!23;CL:0002552!3.56e-07!5;CL:0000048!5.13e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000056;4.90e-16;4!CL:0000515;4.10e-10;3!CL:0000680;2.17e-09;7!CL:0002174;3.32e-08;1!CL:0000228;3.32e-08;1!CL:0002372;3.32e-08;1!CL:0000501;3.32e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,3.09e-16,4;CL:0000228,2.89e-08,1;CL:0002372,2.89e-08,1;CL:0002174,3.57e-08,1;CL:0000501,3.57e-08,1;CL:0000057,2.31e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000515;4.90e-16;4 | |||
|ontology_enrichment_disease=DOID:17!3.05e-07!5;DOID:450!3.05e-07!5;DOID:66!3.05e-07!5;DOID:423!3.05e-07!5;DOID:0080000!3.05e-07!5;DOID:11722!3.05e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.47e-07!375;UBERON:0002097!6.99e-07!40;UBERON:0003102!8.96e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.19e-10;3!UBERON:0001282;3.32e-08;1!UBERON:0009842;3.32e-08;1!UBERON:0003704;3.32e-08;1!UBERON:0001171;3.32e-08;1!UBERON:0001172;3.32e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.62e-10,3;UBERON:0004854,1.62e-10,3;UBERON:0009034,1.62e-10,3;UBERON:0002095,1.62e-10,3;UBERON:0004782,1.62e-10,3;UBERON:0003281,1.62e-10,3;UBERON:0009664,1.62e-10,3;UBERON:0002296,1.62e-10,3;UBERON:0005602,1.62e-10,3;UBERON:0001179,1.62e-10,3;UBERON:0006293,1.62e-10,3;UBERON:0001282,3.83e-08,1;UBERON:0009842,3.83e-08,1;UBERON:0003704,3.83e-08,1;UBERON:0001171,3.83e-08,1;UBERON:0001172,3.83e-08,1 | |||
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| ||
|short_description=p22@PSD3 | |||
}} | }} |
Latest revision as of 06:54, 17 September 2015
Short description: | p22@PSD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_PSD3_5end |
Coexpression cluster: | C1542_Fibroblast_ductal_liposarcoma_large_normal_mesenchymal_Myoblast |
Association with transcript: | -146bp_to_ENST00000521475_5end |
EntrezGene: | PSD3 |
HGNC: | 19093 |
UniProt: | E5RIH3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 3.09e-16 | 4 |
multinucleate cell | 2.89e-08 | 1 |
myotube | 2.89e-08 | 1 |
follicular cell of ovary | 3.57e-08 | 1 |
granulosa cell | 3.57e-08 | 1 |
fibroblast | 2.31e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.62e-10 | 3 |
gastrointestinal system mesentery | 1.62e-10 | 3 |
stomach region | 1.62e-10 | 3 |
mesentery | 1.62e-10 | 3 |
gastrointestinal system serosa | 1.62e-10 | 3 |
mesentery of stomach | 1.62e-10 | 3 |
gut mesentery | 1.62e-10 | 3 |
dorsal mesentery | 1.62e-10 | 3 |
dorsal mesogastrium | 1.62e-10 | 3 |
peritoneal cavity | 1.62e-10 | 3 |
spleen primordium | 1.62e-10 | 3 |
intralobular bile duct | 3.83e-08 | 1 |
acinus | 3.83e-08 | 1 |
intrahepatic bile duct | 3.83e-08 | 1 |
portal lobule | 3.83e-08 | 1 |
hepatic acinus | 3.83e-08 | 1 |