FFCP PHASE1:Hg19::chr5:177540520..177540565,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23138 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29852 | |||
|TSSclassifier=strong | |||
|UniProt=O15049 | |||
|association_with_transcript=0bp_to_NM_015111,uc003mik.1_5end | |||
|cluster_id=chr5:177540520..177540565,+ | |||
|description=CAGE_peak_1_at_N4BP3_5end | |||
|id=chr5:177540520..177540565,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.05e-15!24;CL:0000115!2.63e-14!35;CL:0000071!9.27e-13!18;CL:0002546!9.27e-13!18;CL:0002078!3.35e-11!44;CL:0000542!6.02e-10!53;CL:0000051!6.02e-10!53;CL:0000945!1.47e-09!24;CL:0000826!1.47e-09!24;CL:0000838!1.79e-09!52;CL:0000066!5.45e-09!254;CL:0000236!3.48e-08!14;CL:1000413!8.33e-07!9;CL:0000213!8.61e-07!57;CL:0000215!8.61e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.18e-21;24!CL:0000115;1.29e-17;36!CL:0000071;3.11e-17;18!CL:0000945;7.27e-13;24!CL:0002078;8.19e-11;45!CL:0000236;3.44e-10;13!CL:1000413;6.46e-09;9!CL:0000213;1.46e-07;58!CL:0000215;1.46e-07;58!CL:0002543;4.61e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.00e-21,24;CL:0000115,6.54e-21,36;CL:0000071,2.78e-17,18;CL:0002546,2.78e-17,18;CL:0002078,2.04e-16,45;CL:0000945,7.02e-13,24;CL:0000826,7.02e-13,24;CL:0000213,2.48e-11,58;CL:0000215,2.48e-11,58;CL:0000236,7.31e-11,14;CL:0000542,8.07e-10,53;CL:0000051,8.07e-10,53;CL:0000838,3.10e-09,52;CL:1000413,6.21e-09,9;CL:0000066,1.89e-07,253;CL:0000076,3.07e-07,63;CL:0002543,4.28e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;3.11e-17;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!9.27e-13!18;UBERON:0004638!9.27e-13!18;UBERON:0004852!9.27e-13!18;UBERON:0000487!1.60e-10!22;UBERON:0006914!1.99e-08!25;UBERON:0003915!8.33e-07!9;UBERON:0004700!8.33e-07!9;UBERON:0001917!8.33e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.11e-17;18!UBERON:0001986;3.11e-17;18!UBERON:0004852;3.11e-17;18!UBERON:0000487;4.29e-15;22!UBERON:0006914;2.69e-12;25!UBERON:0000922;5.62e-09;49!UBERON:0003915;6.46e-09;9!UBERON:0004700;6.46e-09;9!UBERON:0001917;6.46e-09;9!UBERON:0000490;8.39e-09;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.78e-17,18;UBERON:0001986,2.78e-17,18;UBERON:0004852,2.78e-17,18;UBERON:0000487,4.46e-15,22;UBERON:0006914,2.76e-12,25;UBERON:0003915,6.21e-09,9;UBERON:0004700,6.21e-09,9;UBERON:0001917,6.21e-09,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0.263766978228454,0,0,0.672325146451775,1.20538905604795,0,0,0,0.408001382488506,0.313454721478088,0,0.136874425072884,0.125542639594803,10.8507036162091,8.94896425004409,7.08397031823113,1.18009283054671,3.45446458287491,2.94150634300544,0.919421224478927,3.91567694411725,1.47901604066715,0,3.9807385096478,0,0.553995408531877,0.601633342410425,1.30206522429511,0,0.971680998056939,0,0.726991193897824,0,0.485168122375632,0.464858073811369,1.23350366406548,0,0,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,0,0.376484679085209,0.272906150057846,0.898893937780338,0,0.641858054152187,0.639337125799041,0,0.199463657621632,0,1.45104619314292,0,0,0.251248665256743,0,0.434377689410233,0.605399502633369,0,0,0,0,0,0,0,0.32145117339416,0,0,0,3.51992488922645,4.91524750135918,5.33705552318133,8.96133467389665,3.2031678962881,3.4485146397269,3.30522436392431,2.86216126360609,4.55370375287559,6.45960908308033,5.3518251937532,5.28685314316103,4.48406850385229,0,0.590129310341499,1.57204305099666,0.616804496998528,0.501559486172034,0.32592226663359,0,0,0.334231370655521,0.294605907474837,0.221533894583621,0,0.25618263945135,0.780356085359269,0.493313713811028,0.552700035571697,0.579606171470105,0,0,0,0.679856056185397,0.383220493601921,0,0.506039384039006,0.318565414324097,0.651083453856419,0.950452044448374,0.602300476311091,0.383959833463255,1.24930726552346,0.236777252044017,0.821127996921047,5.44338206706778,6.68600489458768,5.06885413589796,0,0,0.895037932904712,0.361439152384566,0,0,0.795285947051099,0,0.0945348171640679,0,0,1.44076983047484,1.45718115317017,1.85392221392215,0,0,0.132957960518865,1.43094374583205,0.571994910780128,0.74291500265913,10.5344075904354,7.74211135595512,17.0098845787721,5.6530794192401,5.03399323451887,11.0047216776027,8.56879362800923,4.39308490587859,3.5576626268671,5.02080919147005,26.5867349292037,7.60272105718513,55.4020870634345,7.72092468726324,2.43042584364528,8.12627527385126,5.83776368828041,7.88280363383256,18.397996495906,15.1882505530901,23.4498232230921,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0.311211035399766,2.2900814251847,0.653847612453835,0,0,0,0,1.1409436430889,0.149448680551801,0.23486899728753,0,0,0,0,0.103325781175765,2.37600571456411,0.494533858557114,0,0,0,0,0,0,0,0.300476117813194,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0,0,1.54608682530637,1.36373060295417,0.286804595389004,12.6852654374779,9.40961355082545,8.01738205799677,7.46359596110667,12.1114008420302,4.01475094983413,0,0,0,0,0,2.01121560067735,2.02301628093722,1.92808823906786,2.64705534557745,1.08939722046203,1.66089433377768,2.29213223872279,1.96221465125346,0.769494313892781,7.38155454624648,7.01208869017229,0,0,0,0,0.590789906681404,0,0.860919069801795,0.171567810298526,1.64625428112938,1.1240175325762,2.41269533787914,0.462942225792648,0,0,0,0,0.117408694235822,5.4859250149208,7.40776820122577,3.61482889245737,18.1747011530633,14.5942647556128,0,0,0.148631162288728,0.93733833986777,0.503946384596579,0.425325291727159,0.626909658919938,0.290633938513962,4.21720947081732,0,0.264145302039678,5.1832028885193,3.17063897517315,3.7872730027914,0.380987365753014,1.52795370223311,2.34434894420094,3.4214489204541,1.33675740514321,0,0,0,0,0.22001485746285,0.387815147273333,3.57656445851882,5.071816515336,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0.977208552881205,0.710783897485092,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,1.79336230389644,4.53170748464433,4.52817907204986,2.56686072559497,0.508189248444927,0,0,0.167516265334349,0.637938751653163,0,0,0.828831026872071,0,0,0,0,0,0.157702415033935,0,0,0,1.03473071292505,0,0,0.173767228936166,0,0.343143423810856,0.413536052245775,1.07857100409308,3.52200940751366,0.909382714338778,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,1.20859449591622,0.601519410909855,2.02578175658972,0,0,0.262248829918848,0.451199612907412,1.77135275340154,0,0,0.422206515571503,6.8240030442538,4.25234263191289,5.39789790255348,40.0990856994752,0,0.501689773854853,0.254876273045038,2.49322802678617,0.671624264166535,0,0,0.769350375349168,0,0,7.62503486193145,0,0,1.72279661398852,0,1.6068392984416,1.64340221096607,0,0.614014698904518,0.827019434907183,0,0.145016693914229,0.852266274161009,1.78064071293475,0.330569830721956,0.768760269460425,0.127612712494584,0.708104465988849,0,0,0.6970372701606,0.308033580176089,0,0.869932992075073,0.55597265731176,0,0,0,0,0,0,0,1.56989728039846,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.563391205064483,0,0.0982490410131212,0,0.354761064070598,0.422215270595328,0,0,0,1.73199802905922,0.670302275535787,2.17781969722645,8.28465446835657,0.86101074534246,1.68471475667626,1.33029046061003,2.52695740227655,0,0,0,1.66762242820452,0.411362273086194,0,0.540031437238115,0,1.1750647824022,3.84991942105343,0.980160863924127,7.61793018015447,14.2826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| |||
|short_description=p1@N4BP3 | |||
}} |
Latest revision as of 07:26, 17 September 2015
Short description: | p1@N4BP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_N4BP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_015111, uc003mik.1_5end |
EntrezGene: | N4BP3 |
HGNC: | 29852 |
UniProt: | O15049 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.00e-21 | 24 |
endothelial cell | 6.54e-21 | 36 |
blood vessel endothelial cell | 2.78e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.78e-17 | 18 |
meso-epithelial cell | 2.04e-16 | 45 |
lymphocyte of B lineage | 7.02e-13 | 24 |
pro-B cell | 7.02e-13 | 24 |
lining cell | 2.48e-11 | 58 |
barrier cell | 2.48e-11 | 58 |
B cell | 7.31e-11 | 14 |
lymphocyte | 8.07e-10 | 53 |
common lymphoid progenitor | 8.07e-10 | 53 |
lymphoid lineage restricted progenitor cell | 3.10e-09 | 52 |
endothelial cell of artery | 6.21e-09 | 9 |
epithelial cell | 1.89e-07 | 253 |
squamous epithelial cell | 3.07e-07 | 63 |
vein endothelial cell | 4.28e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.78e-17 | 18 |
endothelium | 2.78e-17 | 18 |
cardiovascular system endothelium | 2.78e-17 | 18 |
simple squamous epithelium | 4.46e-15 | 22 |
squamous epithelium | 2.76e-12 | 25 |
endothelial tube | 6.21e-09 | 9 |
arterial system endothelium | 6.21e-09 | 9 |
endothelium of artery | 6.21e-09 | 9 |