FFCP PHASE1:Hg19::chr10:15089024..15089045,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55301 | |EntrezGene=55301 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=25625 | |HGNC=25625 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-240bp_to_CU690650,HQ448637_5end | |association_with_transcript=-240bp_to_CU690650,HQ448637_5end | ||
|cluster_id=chr10:15089024..15089045,+ | |||
|description=CAGE_peak_4_at_OLAH_5end | |description=CAGE_peak_4_at_OLAH_5end | ||
|id=chr10:15089024..15089045,+ | |id=chr10:15089024..15089045,+ | ||
|ontology_enrichment_celltype=CL:0000039!3.23e-12!7;CL:0000586!3.23e-12!7;CL:0002579!4.03e-08!3;CL:0002580!6.42e-08!3;CL:0000708!1.63e-07!3;CL:0002334!9.81e-07!12 | |ontology_enrichment_celltype=CL:0000039!3.23e-12!7;CL:0000586!3.23e-12!7;CL:0002579!4.03e-08!3;CL:0002580!6.42e-08!3;CL:0000708!1.63e-07!3;CL:0002334!9.81e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.97e-20;7!CL:0000586;1.97e-20;7!CL:0002616;8.85e-17;1!CL:0000136;3.44e-11;13!CL:0002617;7.49e-09;2 | |ontology_enrichment_celltype_v019=CL:0000039;1.97e-20;7!CL:0000586;1.97e-20;7!CL:0002616;8.85e-17;1!CL:0000136;3.44e-11;13!CL:0002617;7.49e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.90e-20,7;CL:0000586,1.90e-20,7;CL:0002616,8.86e-17,1;CL:0000136,8.40e-10,15;CL:0002617,6.42e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.11e-17;1!UBERON:0009117;1.65e-14;10!UBERON:0005564;1.65e-14;10 | |ontology_enrichment_development_v019=UBERON:0003124;5.11e-17;1!UBERON:0009117;1.65e-14;10!UBERON:0005564;1.65e-14;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;6.68e-07;22!DOID:2994;6.68e-07;22 | |ontology_enrichment_disease_v019=DOID:3095;6.68e-07;22!DOID:2994;6.68e-07;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,6.62e-07,22;DOID:2994,6.62e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0003135!3.83e-13!11;UBERON:0000473!7.06e-11!8;UBERON:0003688!2.39e-10!6;UBERON:0002358!2.39e-10!6;UBERON:0003684!2.39e-10!6;UBERON:0001178!2.39e-10!6;UBERON:0007023!6.93e-08!115;UBERON:0003210!1.63e-07!3;UBERON:0003101!3.43e-07!22;UBERON:0000079!3.43e-07!22;UBERON:0002616!5.89e-07!59 | |ontology_enrichment_uberon=UBERON:0003135!3.83e-13!11;UBERON:0000473!7.06e-11!8;UBERON:0003688!2.39e-10!6;UBERON:0002358!2.39e-10!6;UBERON:0003684!2.39e-10!6;UBERON:0001178!2.39e-10!6;UBERON:0007023!6.93e-08!115;UBERON:0003210!1.63e-07!3;UBERON:0003101!3.43e-07!22;UBERON:0000079!3.43e-07!22;UBERON:0002616!5.89e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.74e-18;8!UBERON:0007195;7.57e-17;1!UBERON:0003135;3.01e-13;11!UBERON:0003688;4.37e-11;6!UBERON:0002358;4.37e-11;6!UBERON:0003684;4.37e-11;6!UBERON:0001178;4.37e-11;6!UBERON:0005406;4.70e-09;2!UBERON:0004457;1.09e-07;9!UBERON:0000042;1.09e-07;9!UBERON:0002323;1.95e-07;45!UBERON:0000991;3.31e-07;21!UBERON:0003101;6.68e-07;22!UBERON:0000079;6.68e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;5.74e-18;8!UBERON:0007195;7.57e-17;1!UBERON:0003135;3.01e-13;11!UBERON:0003688;4.37e-11;6!UBERON:0002358;4.37e-11;6!UBERON:0003684;4.37e-11;6!UBERON:0001178;4.37e-11;6!UBERON:0005406;4.70e-09;2!UBERON:0004457;1.09e-07;9!UBERON:0000042;1.09e-07;9!UBERON:0002323;1.95e-07;45!UBERON:0000991;3.31e-07;21!UBERON:0003101;6.68e-07;22!UBERON:0000079;6.68e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.58e-18,8;UBERON:0007195,7.57e-17,1;UBERON:0003135,2.95e-13,11;UBERON:0003688,4.84e-11,6;UBERON:0002358,4.84e-11,6;UBERON:0003684,4.84e-11,6;UBERON:0001178,4.84e-11,6;UBERON:0005406,4.70e-09,2;UBERON:0002323,2.47e-08,46;UBERON:0004458,8.04e-08,49;UBERON:0000991,3.28e-07,21;UBERON:0009196,3.28e-07,21;UBERON:0009117,3.28e-07,21;UBERON:0005564,3.28e-07,21;UBERON:0003886,4.31e-07,54;UBERON:0004176,6.62e-07,22;UBERON:0003101,6.62e-07,22;UBERON:0000079,6.62e-07,22 | |||
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|phase1_expression=1.99846217197612,0,2.25527046553554,0,0.446961094427288,3.48935409640147,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.908144565869588,0,0,0,0,0,0,0,0,0.408308342509787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,1.17408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,0.87192013766656,0.36669142910475,0,0,0,0,0,0.514414748524284,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0,0.496215615637554,0.61384789315225,0.280660094433074,0.768834895534206,1.02341449813341,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88514832613622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,1.116475108079,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44547960578548,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0.10893846351899,0,0.153900517007594,0.113942055847001,0.46112780877612,0.0897576444097721,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0.123563938946503,0.104421949505455,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.19351266257817,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.0607495566580247,0,0.472834243795189,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0.345430341731199,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0.682986574053893,10.555582049354,0,0,0,0,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0.414432328326074,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509944148709909,1.60330443159336,9.74085935069356,10.5297166502798,0.454672189309436,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@OLAH | |short_description=p4@OLAH | ||
}} | }} |
Latest revision as of 08:19, 17 September 2015
Short description: | p4@OLAH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_OLAH_5end |
Coexpression cluster: | NA |
Association with transcript: | -240bp_to_CU690650, HQ448637_5end |
EntrezGene: | OLAH |
HGNC: | 25625 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.90e-20 | 7 |
germ cell | 1.90e-20 | 7 |
perirenal adipocyte cell | 8.86e-17 | 1 |
fat cell | 8.40e-10 | 15 |
adipocyte of breast | 6.42e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 5.58e-18 | 8 |
stroma of bone marrow | 7.57e-17 | 1 |
male reproductive organ | 2.95e-13 | 11 |
omentum | 4.84e-11 | 6 |
peritoneum | 4.84e-11 | 6 |
abdominal cavity | 4.84e-11 | 6 |
visceral peritoneum | 4.84e-11 | 6 |
perirenal fat | 4.70e-09 | 2 |
body cavity | 2.47e-08 | 46 |
body cavity or lining | 8.04e-08 | 49 |
gonad | 3.28e-07 | 21 |
indifferent external genitalia | 3.28e-07 | 21 |
indifferent gonad | 3.28e-07 | 21 |
gonad primordium | 3.28e-07 | 21 |
body cavity precursor | 4.31e-07 | 54 |
external genitalia | 6.62e-07 | 22 |
male organism | 6.62e-07 | 22 |
male reproductive system | 6.62e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 6.62e-07 | 22 |
germ cell cancer | 6.62e-07 | 22 |