FFCP PHASE1:Hg19::chr10:15139394..15139404,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10557 | |EntrezGene=10557 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30329 | |HGNC=30329 | ||
|TSSclassifier=strong | |||
|UniProt=P78345 | |UniProt=P78345 | ||
|association_with_transcript=13bp_to_ENST00000378197_5end | |association_with_transcript=13bp_to_ENST00000378197_5end | ||
|cluster_id=chr10:15139394..15139404,+ | |||
|description=CAGE_peak_4_at_RPP38_5end | |description=CAGE_peak_4_at_RPP38_5end | ||
|id=chr10:15139394..15139404,+ | |id=chr10:15139394..15139404,+ | ||
|ontology_enrichment_celltype=CL:0002322;1.22e-08;5!CL:0002076;3.19e-08;42 | |ontology_enrichment_celltype=CL:0000066!3.92e-18!254;CL:0000542!5.33e-14!53;CL:0000051!5.33e-14!53;CL:0000838!1.63e-13!52;CL:0000223!2.54e-08!59;CL:0002076!1.76e-07!43;CL:0000945!2.63e-07!24;CL:0000826!2.63e-07!24 | ||
| | |ontology_enrichment_celltype_v019=CL:0002322;1.22e-08;5!CL:0002076;3.19e-08;42 | ||
|ontology_enrichment_disease=DOID:1749;3.69e-08;14 | |ontology_enrichment_celltype_v019_2=CL:0000066,1.10e-15,253;CL:0000223,2.44e-12,58;CL:0002076,2.81e-10,42;CL:0000542,5.70e-10,53;CL:0000051,5.70e-10,53;CL:0000838,2.92e-09,52;CL:0002322,1.05e-08,5 | ||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.55e-23!235;DOID:14566!1.19e-22!239;DOID:305!2.50e-21!106;DOID:0050687!4.22e-21!143;DOID:0050686!4.40e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.69e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.42e-16,106;DOID:0050687,1.46e-14,143;DOID:162,1.81e-11,235;DOID:14566,7.63e-11,239;DOID:1749,8.89e-08,14 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@RPP38 | |short_description=p4@RPP38 | ||
}} | }} |
Latest revision as of 08:22, 17 September 2015
Short description: | p4@RPP38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RPP38_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000378197_5end |
EntrezGene: | RPP38 |
HGNC: | 30329 |
UniProt: | P78345 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.10e-15 | 253 |
endodermal cell | 2.44e-12 | 58 |
endo-epithelial cell | 2.81e-10 | 42 |
lymphocyte | 5.70e-10 | 53 |
common lymphoid progenitor | 5.70e-10 | 53 |
lymphoid lineage restricted progenitor cell | 2.92e-09 | 52 |
embryonic stem cell | 1.05e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.42e-16 | 106 |
cell type cancer | 1.46e-14 | 143 |
cancer | 1.81e-11 | 235 |
disease of cellular proliferation | 7.63e-11 | 239 |
squamous cell carcinoma | 8.89e-08 | 14 |