FFCP PHASE1:Hg19::chr10:15139394..15139404,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10557 | |EntrezGene=10557 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30329 | |HGNC=30329 | ||
|TSSclassifier=strong | |||
|UniProt=P78345 | |UniProt=P78345 | ||
|association_with_transcript=13bp_to_ENST00000378197_5end | |association_with_transcript=13bp_to_ENST00000378197_5end | ||
|cluster_id=chr10:15139394..15139404,+ | |||
|description=CAGE_peak_4_at_RPP38_5end | |description=CAGE_peak_4_at_RPP38_5end | ||
|id=chr10:15139394..15139404,+ | |id=chr10:15139394..15139404,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.92e-18!254;CL:0000542!5.33e-14!53;CL:0000051!5.33e-14!53;CL:0000838!1.63e-13!52;CL:0000223!2.54e-08!59;CL:0002076!1.76e-07!43;CL:0000945!2.63e-07!24;CL:0000826!2.63e-07!24 | |ontology_enrichment_celltype=CL:0000066!3.92e-18!254;CL:0000542!5.33e-14!53;CL:0000051!5.33e-14!53;CL:0000838!1.63e-13!52;CL:0000223!2.54e-08!59;CL:0002076!1.76e-07!43;CL:0000945!2.63e-07!24;CL:0000826!2.63e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.22e-08;5!CL:0002076;3.19e-08;42 | |ontology_enrichment_celltype_v019=CL:0002322;1.22e-08;5!CL:0002076;3.19e-08;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.10e-15,253;CL:0000223,2.44e-12,58;CL:0002076,2.81e-10,42;CL:0000542,5.70e-10,53;CL:0000051,5.70e-10,53;CL:0000838,2.92e-09,52;CL:0002322,1.05e-08,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!4.55e-23!235;DOID:14566!1.19e-22!239;DOID:305!2.50e-21!106;DOID:0050687!4.22e-21!143;DOID:0050686!4.40e-07!137 | |ontology_enrichment_disease=DOID:162!4.55e-23!235;DOID:14566!1.19e-22!239;DOID:305!2.50e-21!106;DOID:0050687!4.22e-21!143;DOID:0050686!4.40e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:1749;3.69e-08;14 | |ontology_enrichment_disease_v019=DOID:1749;3.69e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:305,4.42e-16,106;DOID:0050687,1.46e-14,143;DOID:162,1.81e-11,235;DOID:14566,7.63e-11,239;DOID:1749,8.89e-08,14 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,1.09220686065086,0.263766978228454,0.123766352960047,0.662794751455832,0,0,1.46062018077475,0,0.123121058076788,0.408001382488506,0,0.286235987131057,0.136874425072884,0.251085279189606,0.534893840235659,1.64201178899891,0.708397031823113,0,0,0.619264493264304,1.83884244895785,1.204823675113,1.84877005083394,2.01414721508784,1.42169232487422,0.587200878669695,0.553995408531877,0,0.651032612147555,0,0,0.515151135268373,0,0.377875943688809,0.727752183563449,0.464858073811369,0,1.23882548358041,0.28769239232215,0.512321413058201,0,0.344745680736619,0,0,0,0.272906150057846,0,0,0.641858054152187,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0.211255286311942,0,0.209658645508376,0.112328631146495,0,0,0,0,0.182664153764634,1.75996244461323,1.63841583378639,1.77901850772711,1.70692089026603,2.00197993518006,0.574752439954483,1.98313461835459,0.954053754535364,0,0.587237189370939,0.764546456250458,1.32171328579026,0,0,0.590129310341499,1.96505381374582,1.64481199199607,0.334372990781356,1.30368906653436,0.946895611469467,0,0.111410456885174,0.294605907474837,0.221533894583621,0.270803863765016,0.512365278902701,0,0.164437904603676,0.552700035571697,0.579606171470105,1.18629250529648,0.802622484269139,0,0.339928028092699,0.766440987203842,2.06176467289578,1.51811815211702,0.637130828648193,0.651083453856419,0.950452044448374,1.05402583354441,0.255973222308837,1.24930726552346,0.710331756132051,0.821127996921047,2.01606743224732,2.67440195783507,3.04131248153878,0,0,0.511450247374121,0,0,0.144846518960824,0,0.486634870302636,0.567208902984407,0.443458794925128,0.790513071238134,0.327447688744282,0.364295288292542,0,0.649094787309367,0.696518949197069,0,0.953962497221368,0,0.371457501329565,0,0,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,0.0892997282840798,0.44905874525234,0.450445921933289,1.53316637465883,0,0.183201743930407,0,0,0.436094052142534,0.993943903390637,0.379891534993739,0.132409180813219,0,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.67355336034844,0.163461903113459,0.302714855289863,0,0.70296429550139,0.312160076830321,0.570471821544449,0,0.117434498643765,0,0.421352420106746,0.61246251376468,0.245668634623536,0.103325781175765,0,0.494533858557114,0,0,0.505008341862199,0,0,0,0.30648779579902,0.150238058906597,0.794025282120147,0.179389635688862,0.213557388818567,0,0.300091096084402,0.206105058476878,0,0,0,0.292311015483596,0,0.276149695926898,0,0,0,0.169560592310488,1.54608682530637,0.545492241181669,1.14721838155602,3.04934265323988,2.38553582978673,2.20768491452085,2.69518743039963,2.52320850875628,1.09493207722749,0,1.28648187638577,0,0,0,0.473227200159376,0.674338760312407,1.20505514941741,0.882351781859152,0.871517776369625,0.474541238222193,0.404493924480493,0.784885860501384,1.15424147083917,0,1.40241773803446,0.4115740113314,0,0,0,0.590789906681404,0.882926198829301,3.19769940212095,0.171567810298526,0.548751427043128,0,1.00528972411631,1.574003567695,0.977424915930974,0,0,0.231860809950154,0.821860859650752,0.288732895522148,0.462985512576611,0.380508304469197,3.1608175918371,0,0.246217006087397,0,0.445893486866185,0.93733833986777,1.34385702559088,0.992425680696705,0.716468181622786,0.581267877027924,0.766765358330422,0.985326475791887,0,0,0.288239906833923,0.25248486685276,0.571481048629521,0,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0.112131084345361,0,0.51336800074665,0.258543431515556,0,0,0,0,0.514414748524284,0,0.532844358032199,0.142977993658148,0,0.823240336780769,0.325736184293735,1.06617584622764,0,0.301439377059586,0.871533458600294,0.399891964728228,0,0.502257091432126,0,0.239624855491583,0,0,0,0,0,0.560425719967636,1.57624608161542,1.72502059887614,2.43851768931522,0.254094624222463,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0.736148950314839,0,0,0.831883446123229,0.178428988797162,0.630809660135739,0.117141414992713,0.300946099727719,0,0,0,0.368738337083406,0.0868836144680828,0,0.343143423810856,0.413536052245775,0.215714200818617,0.213455115606889,0.303127571446259,0,0.30239029332968,0.496215615637554,0.306923946576125,0.561320188866147,0.256278298511402,0,0.321707842287215,0,0.308419387605311,0.355123450626254,0.164254312027618,0.519254429183621,0,4.10922128611516,1.20303882181971,0.460404944679482,0,0,0.262248829918848,0.451199612907412,0.770153371044148,2.35304930753057,0,0.73886140225013,0,0.340187410553031,1.0795795805107,0,0.541892875087706,1.50506932156456,1.01950509218015,0,1.79099803777743,0.438519753291869,0.522870902049801,0.512900250232778,1.31205858279882,0,0.309123034943167,0.732555718546747,0.41254749960294,4.01985876597321,0.650060246036521,0,0.386682873168488,0.308097234229289,0,0,0.107420244868274,0.145016693914229,0.596586391912706,0.178064071293475,0.661139661443912,1.34533047155574,1.27612712494584,1.0115778085555,0,0,0,0.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| ||
|short_description=p4@RPP38 | |short_description=p4@RPP38 | ||
}} | }} |
Latest revision as of 08:22, 17 September 2015
Short description: | p4@RPP38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RPP38_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000378197_5end |
EntrezGene: | RPP38 |
HGNC: | 30329 |
UniProt: | P78345 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.10e-15 | 253 |
endodermal cell | 2.44e-12 | 58 |
endo-epithelial cell | 2.81e-10 | 42 |
lymphocyte | 5.70e-10 | 53 |
common lymphoid progenitor | 5.70e-10 | 53 |
lymphoid lineage restricted progenitor cell | 2.92e-09 | 52 |
embryonic stem cell | 1.05e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.42e-16 | 106 |
cell type cancer | 1.46e-14 | 143 |
cancer | 1.81e-11 | 235 |
disease of cellular proliferation | 7.63e-11 | 239 |
squamous cell carcinoma | 8.89e-08 | 14 |