FFCP PHASE1:Hg19::chr2:44502630..44502641,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6519 | |EntrezGene=6519 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11025 | |HGNC=11025 | ||
|TSSclassifier=strong | |||
|UniProt=G3V1I5 | |UniProt=G3V1I5 | ||
|association_with_transcript=12bp_to_ENST00000540334_5end | |association_with_transcript=12bp_to_ENST00000540334_5end | ||
|cluster_id=chr2:44502630..44502641,+ | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_3_at_SLC3A1_5end | |description=CAGE_peak_3_at_SLC3A1_5end | ||
|id=chr2:44502630..44502641,+ | |id=chr2:44502630..44502641,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;9.30e-10;1!UBERON:0003104;3.77e-09;31!UBERON:0003918;2.48e-08;10!UBERON:0007687;2.48e-08;10!UBERON:0004161;2.36e-07;11 | |||
|ontology_enrichment_disease=DOID:299!6.92e-08!25 | |ontology_enrichment_disease=DOID:299!6.92e-08!25 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!9.27e-22!35;UBERON:0000160!3.43e-21!27;UBERON:0000059!2.78e-14!11;UBERON:0001155!1.91e-12!9;UBERON:0004907!2.26e-08!5;UBERON:0005172!6.07e-08!55;UBERON:0005173!6.07e-08!55;UBERON:0002108!1.09e-07!14;UBERON:0002113!1.97e-07!27;UBERON:0003918!1.97e-07!27;UBERON:0005095!1.97e-07!27;UBERON:0007687!1.97e-07!27;UBERON:0002417!5.90e-07!61;UBERON:0000916!5.90e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;4.59e-22;22!UBERON:0000160;5.48e-22;17!UBERON:0002108;6.37e-16;4!UBERON:0004921;2.54e-13;33!UBERON:0001301;1.48e-09;1!UBERON:0001155;6.96e-09;9!UBERON:0000059;2.36e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.14e-22,17;UBERON:0005409,1.96e-19,25;UBERON:0002108,6.37e-16,4;UBERON:0001301,1.48e-09,1;UBERON:0001155,6.68e-09,9;UBERON:0005172,7.03e-09,54;UBERON:0005173,7.03e-09,54;UBERON:0002417,6.91e-08,60;UBERON:0000916,6.91e-08,60;UBERON:0000059,2.28e-07,11 | |||
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|short_description=p3@SLC3A1 | |short_description=p3@SLC3A1 | ||
}} | }} |
Latest revision as of 08:53, 17 September 2015
Short description: | p3@SLC3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC3A1_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 12bp_to_ENST00000540334_5end |
EntrezGene: | SLC3A1 |
HGNC: | 11025 |
UniProt: | G3V1I5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 5.14e-22 | 17 |
gastrointestinal system | 1.96e-19 | 25 |
small intestine | 6.37e-16 | 4 |
epididymis | 1.48e-09 | 1 |
colon | 6.68e-09 | 9 |
abdomen element | 7.03e-09 | 54 |
abdominal segment element | 7.03e-09 | 54 |
abdominal segment of trunk | 6.91e-08 | 60 |
abdomen | 6.91e-08 | 60 |
large intestine | 2.28e-07 | 11 |