FFCP PHASE1:Hg19::chr6:26199487..26199494,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3013 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4729 | |||
|TSSclassifier=strong | |||
|UniProt=P20671 | |||
|association_with_transcript=-16bp_to_ENST00000341023,NM_021065,uc003ngw.2_5end | |||
|cluster_id=chr6:26199487..26199494,- | |||
|description=CAGE_peak_1_at_HIST1H2AD_5end | |||
|id=chr6:26199487..26199494,- | |||
|ontology_enrichment_celltype=CL:0000542!3.26e-08!53;CL:0000051!3.26e-08!53;CL:0000838!4.70e-08!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.79e-09,53;CL:0000051,2.79e-09,53;CL:0000838,4.43e-09,52;CL:0000037,7.56e-09,168;CL:0000988,2.39e-08,177;CL:0002032,8.34e-07,161;CL:0000837,8.34e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!1.39e-09!51;DOID:0060083!1.39e-09!51;DOID:1240!2.31e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.99e-08;39!DOID:2531;3.49e-08;51!DOID:0060083;3.49e-08;51!DOID:8692;4.01e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.11e-12,51;DOID:0060083,1.11e-12,51;DOID:1240,1.19e-09,39;DOID:8692,7.21e-08,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@HIST1H2AD | |||
}} |
Latest revision as of 09:00, 17 September 2015
Short description: | p1@HIST1H2AD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HIST1H2AD_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_ENST00000341023, NM_021065, uc003ngw.2_5end |
EntrezGene: | HIST1H2AD |
HGNC: | 4729 |
UniProt: | P20671 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.79e-09 | 53 |
common lymphoid progenitor | 2.79e-09 | 53 |
lymphoid lineage restricted progenitor cell | 4.43e-09 | 52 |
hematopoietic stem cell | 7.56e-09 | 168 |
hematopoietic cell | 2.39e-08 | 177 |
hematopoietic oligopotent progenitor cell | 8.34e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.34e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.11e-12 | 51 |
immune system cancer | 1.11e-12 | 51 |
leukemia | 1.19e-09 | 39 |
myeloid leukemia | 7.21e-08 | 31 |