FFCP PHASE1:Hg19::chr17:72919317..72919368,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=124590 | |EntrezGene=124590 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16356 | |HGNC=16356 | ||
|TSSclassifier=strong | |||
|UniProt=Q495M9 | |UniProt=Q495M9 | ||
|association_with_transcript=0bp_to_ENST00000319642,NM_173477,uc002jme.1,uc010wro.1_5end | |||
|cluster_id=chr17:72919317..72919368,- | |||
|description=CAGE_peak_1_at_USH1G_5end | |||
|id=chr17:72919317..72919368,- | |||
|ontology_enrichment_celltype=CL:0002076!5.85e-17!43;CL:0000223!1.85e-14!59;CL:0000066!2.36e-11!254;CL:0002251!1.82e-08!21;CL:0002368!2.20e-07!13;CL:0002322!7.80e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002251;5.31e-12;20!CL:0002623;1.32e-10;3!CL:0002322;3.76e-10;5!CL:0000575;2.59e-08;2!CL:0000244;4.18e-08;4!CL:0000731;4.18e-08;4!CL:0000123;6.55e-08;2!CL:0000242;6.55e-08;2!CL:0002076;4.34e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,6.37e-12,20;CL:0000066,9.78e-11,253;CL:0002623,1.86e-10,3;CL:0002322,2.05e-10,5;CL:0002076,4.29e-10,42;CL:0000223,5.63e-09,58;CL:0000575,2.60e-08,2;CL:0000244,5.40e-08,4;CL:0000731,5.40e-08,4;CL:0000242,7.26e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.64e-09!14;DOID:305!2.65e-08!106;DOID:0050687!3.57e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.24e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.43e-11,14;DOID:305,2.89e-09,106;DOID:0050687,4.21e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.14e-10!169;UBERON:0000925!3.14e-10!169;UBERON:0006595!3.14e-10!169;UBERON:0001007!1.85e-07!155;UBERON:0001555!1.85e-07!155;UBERON:0007026!1.85e-07!155;UBERON:0004921!2.11e-07!129;UBERON:0004185!2.11e-07!129;UBERON:0001004!3.68e-07!72 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0,0.919421224478927,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,14.2075162434091,9.26961106961073,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.72188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,1.58565817968474,2.51806559810822,1.62671520017326,1.7622379352613,0.504641701751257,5.10968302706162,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,1.22988438543114,0,0.658501712451753,0,0.100528972411631,3.88871469665824,0,0,0,0,0,0,0,0,2.37061319387782,0,0,0,0,0,0.335964256397719,0.141775097242386,0.268675568108545,0.290633938513962,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0.200506470303285,1.19705285616665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.165018999841176,0,0.650060246036521,0,0,0,0,0,0.107420244868274,0,0,0,0.991709492165869,0.384380134730212,0.127612712494584,0.809262246844399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.673554789078584,2.01090682660736,1.08890984861323,0,0.43050537267123,3.36942951335251,8.42517291719684,1.1486170010348,0,0,0,0,0,0,0,0,1.6023610669121,0.962479855263359,0.980160863924127,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6653598399891,0,0,0,1.21360521749513,0,0,0.47748896947538,0,1.53580351049616,0,0.140669416410513,0,0.16480387422676,0.422250816255987,0.19924798825107,0,1.0077309914171,0,0.492339221844278,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,1.99613798001194,0,0.262379999988587,0,6.37243310398798,0,0.945550727071745,11.7212746902098,0,0.520874984799877,0,0,0,5.63954225649246,2.06883333267483,0,0,18.264510500497,0.538651809526579,0,0.23056390438806,0,0,0,0,0,0,0,0,0.676786981851542,0.784250137270958,0.671286347903371,0,0,0,0,0,0,0,0,1.22206028986725,0.296521128680622,0.123563938946503,0,0,0.802577647298789,0,0,1.56531695145672,0,0.394584402849391,0,0.30607276163049,0,0.300646838828985,0,0.664653872707185,0,0.313932918407225,0,0.284609546029793,0.554698692052555,1.56203764501618,5.78155144744828,0,4.71762004253481,0,0,0,0,0.969890164884194,1.588610280447,2.03382666702479,0,0,0.0633107959558787,1.75996244461323,0,0,0.39961921916426,0.144090417154106,0.687219576995494,0,0,0.124252535565433,4.9495747269527,0,0.209205692624666,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.998395002494955,0,0,0,0,2.32991899054908,0,0.164831716762333,0.0674035438541849,0,0,0,0.272406812223151,0.643012593860077,0.962776056180637,1.66176135211674,0,0,0,29.8536871963347,0.0788057072991982,0.891727998294968,0.211200673038813,0,1.91915197319445,0,0,0,0,0,0,0,0.246277562248017,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,2.55336503108073,0,0,0,0,0.157054096250234,0,0,0,0,0.221858103073705,0.124192805882767,0.276697269872462,0.37494122388632,0,0.285465333544967,0,4.68334905806882,4.6374729155464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.426766918776564,0,0,0,5.17554178561945,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,20.1202822927103,0.11796972334774,12.4731446994742,0.115525666150338,0,0,0,1.20336525358812,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,1.40538670403555,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,1.06374456795571,0,0,0,0.840816489941367,0,0,0,0.500335809236594,2.52821778772363,0.116241425368125,0,0,1.03608082081518,3.92652497316085,5.53007729451273,0,0,0,0,0,0,0,2.57267493134922,0,0,0,0,0,2.4285549652957,0,1.39265542612958,0.713520544665411,0,0.439762066981716,0,0.231522474323834,0.655678681511872,0,0.245148321753905,0.235676547101626,0,0,0,0,0,0.0644578879735772,0.299823467774787,5.35661815816973,0,0,0,0,0,0.157771562193185,0,0,2.1161073620616,0,0,0,0.378499274505237,0,1.26698501011437,0.407955318967927,0,0,0,0.530450887527676,0.535928260312357,0,0,0.213233981900981,0.714193294391221,0.129177819672012,0.0620747142958579,0,0,0.202117188958219,0.435433495793923,2.05339980651169,0.26940821205835,0.143444410785353,0,0.162806537221949,0,0,0.0898252021065869,4.69281884806909,0.733448665097199,0,0.665756774185513,0,0 | 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|short_description=p1@USH1G | |||
}} | }} |
Latest revision as of 09:17, 17 September 2015
Short description: | p1@USH1G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_USH1G_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000319642, NM_173477, uc002jme.1, uc010wro.1_5end |
EntrezGene: | USH1G |
HGNC: | 16356 |
UniProt: | Q495M9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 6.37e-12 | 20 |
epithelial cell | 9.78e-11 | 253 |
acinar cell of salivary gland | 1.86e-10 | 3 |
embryonic stem cell | 2.05e-10 | 5 |
endo-epithelial cell | 4.29e-10 | 42 |
endodermal cell | 5.63e-09 | 58 |
corneal epithelial cell | 2.60e-08 | 2 |
transitional epithelial cell | 5.40e-08 | 4 |
urothelial cell | 5.40e-08 | 4 |
Merkel cell | 7.26e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.43e-11 | 14 |
carcinoma | 2.89e-09 | 106 |
cell type cancer | 4.21e-07 | 143 |