FFCP PHASE1:Hg19::chr6:26250853..26250874,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:26250853..26250874,- to FFCP PHASE1:Hg19::chr6:26250853..26250874,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8350,8351,8352,8353,8354,8355,8356,8357,8358,8968 | |EntrezGene=8350,8351,8352,8353,8354,8355,8356,8357,8358,8968 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4766,4767,4768,4769,4771,4772,4773,4774,4775,4776 | |HGNC=4766,4767,4768,4769,4771,4772,4773,4774,4775,4776 | ||
|TSSclassifier=strong | |||
|UniProt=P68431 | |UniProt=P68431 | ||
|association_with_transcript=-18bp_to_ENST00000446824,NM_021018,uc003nhg.1_5end | |||
|cluster_id=chr6:26250853..26250874,- | |||
|coexpression_cluster_id=C241 | |||
|description=CAGE_peak_7_at_HIST1H3A_5end,CAGE_peak_7_at_HIST1H3B_5end,CAGE_peak_7_at_HIST1H3C_5end,CAGE_peak_7_at_HIST1H3D_5end,CAGE_peak_7_at_HIST1H3E_5end,CAGE_peak_7_at_HIST1H3F_5end,CAGE_peak_7_at_HIST1H3G_5end,CAGE_peak_7_at_HIST1H3I_5end,CAGE_peak_7_at_HIST1H3J_5end,CAGE_peak_8_at_HIST1H3H_5end | |||
|id=chr6:26250853..26250874,- | |||
|ontology_enrichment_celltype=CL:0000012!1.19e-10!682;CL:0000548!3.75e-10!679;CL:0000004!3.75e-10!679;CL:0000255!3.75e-10!679;CL:0000066!3.86e-09!254;CL:0002321!3.63e-07!248;CL:0000220!7.30e-07!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.06e-09,253;CL:0002321,2.80e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!1.19e-11!51;DOID:0060083!1.19e-11!51;DOID:8692!8.57e-10!31;DOID:162!1.04e-09!235;DOID:1240!1.59e-09!39;DOID:14566!2.70e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.88e-09;31!DOID:2531;5.85e-08;51!DOID:0060083;5.85e-08;51!DOID:1240;4.00e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.04e-11,51;DOID:0060083,1.04e-11,51;DOID:162,6.22e-10,235;DOID:8692,8.11e-10,31;DOID:1240,1.38e-09,39;DOID:14566,1.65e-09,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p7@HIST1H3A,p7@HIST1H3B,p7@HIST1H3C,p7@HIST1H3D,p7@HIST1H3E,p7@HIST1H3F,p7@HIST1H3G,p7@HIST1H3I,p7@HIST1H3J,p8@HIST1H3H | |||
}} | }} |
Latest revision as of 09:19, 17 September 2015
Short description: | p7@HIST1H3A, p7@HIST1H3B, p7@HIST1H3C, p7@HIST1H3D, p7@HIST1H3E, p7@HIST1H3F, p7@HIST1H3G, p7@HIST1H3I, p7@HIST1H3J, p8@HIST1H3H |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_HIST1H3A_5end, CAGE_peak_7_at_HIST1H3B_5end, CAGE_peak_7_at_HIST1H3C_5end, CAGE_peak_7_at_HIST1H3D_5end, CAGE_peak_7_at_HIST1H3E_5end, CAGE_peak_7_at_HIST1H3F_5end, CAGE_peak_7_at_HIST1H3G_5end, CAGE_peak_7_at_HIST1H3I_5end, CAGE_peak_7_at_HIST1H3J_5end, CAGE_peak_8_at_HIST1H3H_5end |
Coexpression cluster: | C241_Reticulocytes_chronic_Tracheal_Hodgkin_Endothelial_Hair_thymus |
Association with transcript: | -18bp_to_ENST00000446824, NM_021018, uc003nhg.1_5end |
EntrezGene: | 8350,8351,8352,8353,8354,8355,8356,8357,8358,8968 |
HGNC: | 4767, 4768, 4769, 4771, 4772, 4773, 4774, 4775, 4776&submit=Submit 4766, 4767, 4768, 4769, 4771, 4772, 4773, 4774, 4775, 4776 |
UniProt: | P68431 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.06e-09 | 253 |
embryonic cell | 2.80e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.04e-11 | 51 |
immune system cancer | 1.04e-11 | 51 |
cancer | 6.22e-10 | 235 |
myeloid leukemia | 8.11e-10 | 31 |
leukemia | 1.38e-09 | 39 |
disease of cellular proliferation | 1.65e-09 | 239 |