FFCP PHASE1:Hg19::chr19:3557800..3557811,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=126321 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28299 | |||
|TSSclassifier=strong | |||
|UniProt=Q6NUT3,E9PAJ8,A8MXP7 | |||
|association_with_transcript=-229bp_to_ENST00000355415,ENST00000389395,ENST00000398558,NM_001042680,NM_021731,NM_174983,uc002lxw.2,uc002lxx.2,uc002lxz.2_5end | |||
|cluster_id=chr19:3557800..3557811,- | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_9_at_MFSD12_5end | |||
|id=chr19:3557800..3557811,- | |||
|ontology_enrichment_celltype=CL:0000148!3.32e-47!10;CL:0000541!3.32e-47!10;CL:0000147!1.47e-33!14;CL:0002567!3.11e-30!3;CL:0002150!1.63e-28!3;CL:0000861!1.63e-28!3;CL:0000235!2.38e-23!10;CL:0000710!2.62e-23!20;CL:0000075!4.31e-17!27;CL:0002077!7.40e-14!33;CL:0000325!1.30e-11!39;CL:0002566!3.76e-11!1;CL:0000333!1.83e-10!41;CL:0000066!3.68e-08!254;CL:0000133!3.74e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.29e-117;10!CL:0002567;6.72e-99;3!CL:0000147;2.84e-84;14!CL:0000710;3.03e-59;20!CL:0000075;4.38e-44;27!CL:0002566;5.97e-34;1!CL:0002077;1.06e-29;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.29e-117,10;CL:0000541,1.29e-117,10;CL:0002567,5.69e-99,3;CL:0000147,2.84e-84,14;CL:0000710,3.03e-59,20;CL:0000075,4.38e-44,27;CL:0002077,3.73e-35,34;CL:0002566,7.06e-34,1;CL:0000333,6.20e-28,41;CL:0000133,7.27e-20,59;CL:0000221,1.82e-16,72 | |||
|ontology_enrichment_development_v019=CL:0000133;4.26e-12;59!CL:0000221;5.59e-09;72 | |||
|ontology_enrichment_disease=DOID:305!2.31e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!4.53e-50!9;UBERON:0001557!1.95e-23!19;UBERON:0008947!2.16e-11!38;UBERON:0003258!2.16e-11!38;UBERON:0000072!2.73e-09!46;UBERON:0000065!5.72e-08!53 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.505754070234305,0.241011029883482,0.110293972732394,0.217879444092406,0,0.269662616320329,0,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,6.41328732350907,13.751583320098,17.582617081507,6.84289784090821,7.71206195274926,0.901029173531752,1.71495859578347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.511625219603299,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@MFSD12 | |||
}} |
Latest revision as of 09:43, 17 September 2015
Short description: | p9@MFSD12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MFSD12_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -229bp_to_ENST00000355415, ENST00000389395, ENST00000398558, NM_001042680, NM_021731, NM_174983, uc002lxw.2, uc002lxx.2, uc002lxz.2_5end |
EntrezGene: | MFSD12 |
HGNC: | 28299 |
UniProt: | Q6NUT3E9PAJ8A8MXP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.29e-117 | 10 |
melanoblast | 1.29e-117 | 10 |
light melanocyte | 5.69e-99 | 3 |
pigment cell | 2.84e-84 | 14 |
neurecto-epithelial cell | 3.03e-59 | 20 |
columnar/cuboidal epithelial cell | 4.38e-44 | 27 |
ecto-epithelial cell | 3.73e-35 | 34 |
dark melanocyte | 7.06e-34 | 1 |
migratory neural crest cell | 6.20e-28 | 41 |
neurectodermal cell | 7.27e-20 | 59 |
ectodermal cell | 1.82e-16 | 72 |