FFCP PHASE1:Hg19::chr3:190040714..190040725,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9076 | |EntrezGene=9076 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2032 | |HGNC=2032 | ||
|TSSclassifier=strong | |||
|UniProt=O95832 | |UniProt=O95832 | ||
|association_with_transcript=-450bp_to_ENST00000295522_5end | |association_with_transcript=-450bp_to_ENST00000295522_5end | ||
|cluster_id=chr3:190040714..190040725,- | |||
|coexpression_cluster_id=C4314 | |||
|description=CAGE_peak_3_at_CLDN1_5end | |description=CAGE_peak_3_at_CLDN1_5end | ||
|id=chr3:190040714..190040725,- | |id=chr3:190040714..190040725,- | ||
|ontology_enrichment_celltype=CL:0002076!4.57e-13!43;CL:0000066!6.27e-11!254;CL:0002159!1.42e-10!13;CL:0000223!8.26e-10!59;CL:0002166!7.75e-07!3;CL:0002251!7.99e-07!21 | |ontology_enrichment_celltype=CL:0002076!4.57e-13!43;CL:0000066!6.27e-11!254;CL:0002159!1.42e-10!13;CL:0000223!8.26e-10!59;CL:0002166!7.75e-07!3;CL:0002251!7.99e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0001014;3.46e-21;2!CL:0001016;3.46e-21;2!CL:1001319;3.81e-11;1!CL:1000600;3.81e-11;1!CL:0000453;4.87e-09;5!CL:0000622;8.84e-09;5!CL:0002251;3.05e-08;20!CL:0000840;1.13e-07;5!CL:0000154;1.86e-07;6!CL:0002159;6.43e-07;14!CL:0002076;8.39e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,4.25e-21,2;CL:0001016,4.25e-21,2;CL:1001319,4.91e-11,1;CL:1000600,4.91e-11,1;CL:0000453,5.28e-09,5;CL:0000622,8.17e-09,5;CL:0002251,2.67e-08,20;CL:0002076,2.82e-08,42;CL:0000840,1.21e-07,5;CL:0001029,1.21e-07,5;CL:0000154,1.74e-07,6;CL:0002159,5.80e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.71e-11!14 | |ontology_enrichment_disease=DOID:1749!2.71e-11!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;5.60e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.45e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0000161!1.24e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;1.18e-11;1!UBERON:0003343;3.12e-11;4!UBERON:0004785;3.12e-11;4!UBERON:0004645;3.81e-11;1!UBERON:0001256;3.81e-11;1!UBERON:0001259;3.81e-11;1!UBERON:0000365;8.84e-09;5!UBERON:0000161;1.14e-08;19!UBERON:0000166;1.14e-08;19!UBERON:0000344;3.05e-08;20!UBERON:0000486;6.50e-08;12!UBERON:0000974;8.95e-08;6!UBERON:0003729;1.48e-07;13!UBERON:0005910;1.86e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,1.18e-11,1;UBERON:0003343,2.97e-11,4;UBERON:0004785,2.97e-11,4;UBERON:0004645,4.91e-11,1;UBERON:0001256,4.91e-11,1;UBERON:0001259,4.91e-11,1;UBERON:0000365,9.95e-09,5;UBERON:0000344,2.99e-08,20;UBERON:0003729,1.37e-07,13;UBERON:0000166,1.47e-07,22;UBERON:0005910,2.05e-07,6;UBERON:0000161,7.66e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0.087834785693126,0.523916301990851,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,1.36373060295417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0.343135620597051,2.85350742062426,0,0.201057944823262,0.185176890317059,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,1.6798212819886,0.992425680696705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.200506470303285,0.0920809889358963,0,0,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0.618246069886334,0,0,0.574265537996172,1.30012049207304,0,0,0.154048617114644,0,0,0,0,0,0,2.14870389969272,0.192190067365106,0.510450849978337,0.6069466851333,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.673554789078584,0,0,0.282431402330337,0,0,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,1.33570446027487,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0.265372693510018,0,0.296521128680622,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,10.2459436570725,0,0,0.489961987071888,0.174118413160805,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0,0,0.160317640503067,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,2.0247650239635,2.32140586367385,0,0,0.0788057072991982,0.157363764404994,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0.732761168390412,0,0,0,0,0,0.106787412567695,0,0,0,0,0,8.29843635101236,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,1.34940933649081,0.310525913752519,0,0,0,1.05180326298053,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0.76872455576384,0,0,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0.139879507719444,0.622077260032973,0,0,0.314531883711793,0,0.169732529954025,0.212574920101683,0.247871528518004,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,2.75142897782519,11.0904639504325,0,0,0,1.0529445968896,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0,0.51215543128185,1.38251932362818,0,0,0.0852134047591577,0.423387050190929,0.68732060563215,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0.178553938605658,3.17605384544123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0,0.23806443146374,0.129177819672012,0.186224142887574,0.448527450322454,0,0,0,0,0.26940821205835,0.358611026963382,0,1.13964576055364,0.213454691755431,0,0,0,4.64517487894893,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0.087834785693126,0.523916301990851,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,1.36373060295417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0.343135620597051,2.85350742062426,0,0.201057944823262,0.185176890317059,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,1.6798212819886,0.992425680696705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.200506470303285,0.0920809889358963,0,0,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0.618246069886334,0,0,0.574265537996172,1.30012049207304,0,0,0.154048617114644,0,0,0,0,0,0,2.14870389969272,0.192190067365106,0.510450849978337,0.6069466851333,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.673554789078584,0,0,0.282431402330337,0,0,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,1.33570446027487,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0.265372693510018,0,0.296521128680622,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,10.2459436570725,0,0,0.489961987071888,0.174118413160805,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0,0,0.160317640503067,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,2.0247650239635,2.32140586367385,0,0,0.0788057072991982,0.157363764404994,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0.732761168390412,0,0,0,0,0,0.106787412567695,0,0,0,0,0,8.29843635101236,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,1.34940933649081,0.310525913752519,0,0,0,1.05180326298053,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0.76872455576384,0,0,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0.139879507719444,0.622077260032973,0,0,0.314531883711793,0,0.169732529954025,0.212574920101683,0.247871528518004,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,2.75142897782519,11.0904639504325,0,0,0,1.0529445968896,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0,0.51215543128185,1.38251932362818,0,0,0.0852134047591577,0.423387050190929,0.68732060563215,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0.178553938605658,3.17605384544123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0,0.23806443146374,0.129177819672012,0.186224142887574,0.448527450322454,0,0,0,0,0.26940821205835,0.358611026963382,0,1.13964576055364,0.213454691755431,0,0,0,4.64517487894893,0,0,0,0 | ||
|short_description=p3@CLDN1 | |short_description=p3@CLDN1 | ||
}} | }} |
Latest revision as of 09:49, 17 September 2015
Short description: | p3@CLDN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CLDN1_5end |
Coexpression cluster: | C4314_oral_endometrial_malignant_uterus_squamous_immature_Keratinocyte |
Association with transcript: | -450bp_to_ENST00000295522_5end |
EntrezGene: | CLDN1 |
HGNC: | 2032 |
UniProt: | O95832 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 4.25e-21 | 2 |
immature CD1a-positive Langerhans cell | 4.25e-21 | 2 |
bladder cell | 4.91e-11 | 1 |
lower urinary tract cell | 4.91e-11 | 1 |
Langerhans cell | 5.28e-09 | 5 |
acinar cell | 8.17e-09 | 5 |
epithelial cell of alimentary canal | 2.67e-08 | 20 |
endo-epithelial cell | 2.82e-08 | 42 |
immature conventional dendritic cell | 1.21e-07 | 5 |
common dendritic progenitor | 1.21e-07 | 5 |
protein secreting cell | 1.74e-07 | 6 |
general ecto-epithelial cell | 5.80e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 1.18e-11 | 1 |
mucosa of oral region | 2.97e-11 | 4 |
respiratory system mucosa | 2.97e-11 | 4 |
urinary bladder urothelium | 4.91e-11 | 1 |
wall of urinary bladder | 4.91e-11 | 1 |
mucosa of urinary bladder | 4.91e-11 | 1 |
urothelium | 9.95e-09 | 5 |
mucosa | 2.99e-08 | 20 |
mouth mucosa | 1.37e-07 | 13 |
oral opening | 1.47e-07 | 22 |
transitional epithelium | 2.05e-07 | 6 |
orifice | 7.66e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.45e-12 | 14 |