FFCP PHASE1:Hg19::chr1:28503825..28503832,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5724 | |EntrezGene=5724 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9582 | |HGNC=9582 | ||
|TSSclassifier=strong | |||
|UniProt=P25105 | |UniProt=P25105 | ||
|association_with_transcript=-126bp_to_ENST00000373857_5end | |association_with_transcript=-126bp_to_ENST00000373857_5end | ||
|cluster_id=chr1:28503825..28503832,- | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_12_at_PTAFR_5end | |description=CAGE_peak_12_at_PTAFR_5end | ||
|id=chr1:28503825..28503832,- | |id=chr1:28503825..28503832,- | ||
|ontology_enrichment_celltype=CL:0000766!1.83e-28!76;CL:0000738!1.22e-25!140;CL:0002031!6.58e-24!124;CL:0002032!7.46e-24!165;CL:0000837!7.46e-24!165;CL:0000839!1.30e-23!70;CL:0000557!3.28e-23!71;CL:0000037!1.45e-22!172;CL:0000566!1.45e-22!172;CL:0000763!5.72e-21!112;CL:0000049!5.72e-21!112;CL:0000988!6.78e-21!182;CL:0002087!7.22e-18!119;CL:0002194!5.00e-17!63;CL:0000576!5.00e-17!63;CL:0000040!5.00e-17!63;CL:0000559!5.00e-17!63;CL:0002009!2.20e-16!65;CL:0002274!1.93e-14!5;CL:0000457!1.93e-14!5;CL:0002191!1.93e-14!5;CL:0000097!1.93e-14!5;CL:0000831!1.93e-14!5;CL:0002028!1.93e-14!5;CL:0002619!3.08e-13!3;CL:0002057!6.68e-12!42;CL:0000860!6.08e-11!45;CL:0000945!1.29e-10!24;CL:0000826!1.29e-10!24;CL:0000163!4.86e-08!9;CL:0000775!7.53e-07!3;CL:0000134!8.11e-07!358 | |ontology_enrichment_celltype=CL:0000766!1.83e-28!76;CL:0000738!1.22e-25!140;CL:0002031!6.58e-24!124;CL:0002032!7.46e-24!165;CL:0000837!7.46e-24!165;CL:0000839!1.30e-23!70;CL:0000557!3.28e-23!71;CL:0000037!1.45e-22!172;CL:0000566!1.45e-22!172;CL:0000763!5.72e-21!112;CL:0000049!5.72e-21!112;CL:0000988!6.78e-21!182;CL:0002087!7.22e-18!119;CL:0002194!5.00e-17!63;CL:0000576!5.00e-17!63;CL:0000040!5.00e-17!63;CL:0000559!5.00e-17!63;CL:0002009!2.20e-16!65;CL:0002274!1.93e-14!5;CL:0000457!1.93e-14!5;CL:0002191!1.93e-14!5;CL:0000097!1.93e-14!5;CL:0000831!1.93e-14!5;CL:0002028!1.93e-14!5;CL:0002619!3.08e-13!3;CL:0002057!6.68e-12!42;CL:0000860!6.08e-11!45;CL:0000945!1.29e-10!24;CL:0000826!1.29e-10!24;CL:0000163!4.86e-08!9;CL:0000775!7.53e-07!3;CL:0000134!8.11e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.47e-23;24!CL:0000097;1.48e-18;5!CL:0000163;9.23e-11;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.02e-23,24;CL:0000826,3.02e-23,24;CL:0000097,1.77e-18,5;CL:0002028,1.77e-18,5;CL:0000838,7.41e-11,52;CL:0000163,1.02e-10,9;CL:0000542,1.18e-10,53;CL:0000051,1.18e-10,53;CL:0002031,8.06e-09,120;CL:0002032,1.70e-08,161;CL:0000837,1.70e-08,161;CL:0000037,3.94e-08,168;CL:0000738,9.19e-08,136;CL:0000988,1.06e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:74!1.07e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:2355;4.10e-23;1!DOID:74;2.90e-12;2!DOID:1287;9.10e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,3.28e-23,1;DOID:74,2.59e-12,2;DOID:1287,8.61e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.10e-21!102;UBERON:0003061!1.10e-21!102;UBERON:0002371!4.85e-20!80;UBERON:0002193!3.25e-19!112;UBERON:0001474!2.71e-18!86;UBERON:0004765!7.81e-15!101;UBERON:0001434!7.81e-15!101;UBERON:0002405!9.70e-14!115;UBERON:0003081!6.07e-08!216;UBERON:0002204!4.68e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p12@PTAFR | |short_description=p12@PTAFR | ||
}} | }} |
Latest revision as of 10:00, 17 September 2015
Short description: | p12@PTAFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PTAFR_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -126bp_to_ENST00000373857_5end |
EntrezGene: | PTAFR |
HGNC: | 9582 |
UniProt: | P25105 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.02e-23 | 24 |
pro-B cell | 3.02e-23 | 24 |
mast cell | 1.77e-18 | 5 |
basophil mast progenitor cell | 1.77e-18 | 5 |
lymphoid lineage restricted progenitor cell | 7.41e-11 | 52 |
endocrine cell | 1.02e-10 | 9 |
lymphocyte | 1.18e-10 | 53 |
common lymphoid progenitor | 1.18e-10 | 53 |
hematopoietic lineage restricted progenitor cell | 8.06e-09 | 120 |
hematopoietic oligopotent progenitor cell | 1.70e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.70e-08 | 161 |
hematopoietic stem cell | 3.94e-08 | 168 |
leukocyte | 9.19e-08 | 136 |
hematopoietic cell | 1.06e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
anemia | 3.28e-23 | 1 |
hematopoietic system disease | 2.59e-12 | 2 |
cardiovascular system disease | 8.61e-07 | 4 |