FFCP PHASE1:Hg19::chr17:73127808..73127821,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30833 | |EntrezGene=30833 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17144 | |HGNC=17144 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TCD5 | |UniProt=Q8TCD5 | ||
|association_with_transcript=55bp_to_ENST00000245552,uc002jmx.2,uc002jmy.2_5end | |association_with_transcript=55bp_to_ENST00000245552,uc002jmx.2,uc002jmy.2_5end | ||
|cluster_id=chr17:73127808..73127821,- | |||
|description=CAGE_peak_2_at_NT5C_5end | |description=CAGE_peak_2_at_NT5C_5end | ||
|id=chr17:73127808..73127821,- | |id=chr17:73127808..73127821,- | ||
|ontology_enrichment_celltype=CL:0000012!7.01e-15!682;CL:0000548!1.82e-14!679;CL:0000004!1.82e-14!679;CL:0000255!1.82e-14!679;CL:0000066!4.12e-14!254;CL:0002321!2.56e-13!248;CL:0000220!6.40e-13!246;CL:0000055!3.46e-11!180;CL:0000003!2.26e-10!722;CL:0000222!6.21e-08!119;CL:0000144!6.95e-08!625;CL:1000449!1.06e-07!16;CL:0000183!1.34e-07!59;CL:1000497!5.12e-07!18;CL:0002518!5.12e-07!18;CL:0000359!7.19e-07!32;CL:0000192!9.00e-07!42;CL:0000514!9.00e-07!42 | |ontology_enrichment_celltype=CL:0000012!7.01e-15!682;CL:0000548!1.82e-14!679;CL:0000004!1.82e-14!679;CL:0000255!1.82e-14!679;CL:0000066!4.12e-14!254;CL:0002321!2.56e-13!248;CL:0000220!6.40e-13!246;CL:0000055!3.46e-11!180;CL:0000003!2.26e-10!722;CL:0000222!6.21e-08!119;CL:0000144!6.95e-08!625;CL:1000449!1.06e-07!16;CL:0000183!1.34e-07!59;CL:1000497!5.12e-07!18;CL:0002518!5.12e-07!18;CL:0000359!7.19e-07!32;CL:0000192!9.00e-07!42;CL:0000514!9.00e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:1000449;3.10e-08;15!CL:0000359;2.74e-07;32!CL:1000497;3.67e-07;17!CL:0002518;3.67e-07;17!CL:0002681;8.42e-07;12!CL:0002584;8.42e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.16e-14,253;CL:0002321,9.78e-14,250;CL:1000449,1.86e-08,15;CL:0000222,2.98e-08,121;CL:1000497,1.21e-07,17;CL:0002518,1.21e-07,17;CL:0002681,5.69e-07,12;CL:0002584,5.69e-07,12;CL:0000359,6.78e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.36e-08!118;UBERON:0004211!1.06e-07!16;UBERON:0001285!1.06e-07!16;UBERON:0007684!1.06e-07!16;UBERON:0003220!1.06e-07!16;UBERON:0004208!1.06e-07!16;UBERON:0000486!1.20e-07!82;UBERON:0003104!1.20e-07!238;UBERON:0009142!1.20e-07!238;UBERON:0006555!7.98e-07!17;UBERON:0005103!7.98e-07!17;UBERON:0000083!7.98e-07!17;UBERON:0009201!7.98e-07!17;UBERON:0004819!7.98e-07!17;UBERON:0006553!7.98e-07!17;UBERON:0003074!7.98e-07!17;UBERON:0003060!7.98e-07!17 | |ontology_enrichment_uberon=UBERON:0003914!3.36e-08!118;UBERON:0004211!1.06e-07!16;UBERON:0001285!1.06e-07!16;UBERON:0007684!1.06e-07!16;UBERON:0003220!1.06e-07!16;UBERON:0004208!1.06e-07!16;UBERON:0000486!1.20e-07!82;UBERON:0003104!1.20e-07!238;UBERON:0009142!1.20e-07!238;UBERON:0006555!7.98e-07!17;UBERON:0005103!7.98e-07!17;UBERON:0000083!7.98e-07!17;UBERON:0009201!7.98e-07!17;UBERON:0004819!7.98e-07!17;UBERON:0006553!7.98e-07!17;UBERON:0003074!7.98e-07!17;UBERON:0003060!7.98e-07!17 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;3.10e-08;15!UBERON:0004819;3.10e-08;15!UBERON:0001285;3.10e-08;15!UBERON:0007684;3.10e-08;15!UBERON:0006554;4.30e-08;30!UBERON:0001008;4.30e-08;30!UBERON:0002113;6.28e-07;24!UBERON:0011143;6.28e-07;24!UBERON:0001225;8.42e-07;12!UBERON:0008987;8.42e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.40e-08,117;UBERON:0004211,1.86e-08,15;UBERON:0009773,1.86e-08,15;UBERON:0001231,1.86e-08,15;UBERON:0001285,1.86e-08,15;UBERON:0007684,1.86e-08,15;UBERON:0004208,1.86e-08,15;UBERON:0007503,6.78e-08,78;UBERON:0003104,1.59e-07,160;UBERON:0009142,1.59e-07,160;UBERON:0000486,1.61e-07,83;UBERON:0006555,1.83e-07,16;UBERON:0004819,1.83e-07,16;UBERON:0002100,2.78e-07,199;UBERON:0001225,5.69e-07,12;UBERON:0008987,5.69e-07,12 | |||
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| ||
|short_description=p2@NT5C | |short_description=p2@NT5C | ||
}} | }} |
Latest revision as of 10:05, 17 September 2015
Short description: | p2@NT5C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NT5C_5end |
Coexpression cluster: | NA |
Association with transcript: | 55bp_to_ENST00000245552, uc002jmx.2, uc002jmy.2_5end |
EntrezGene: | NT5C |
HGNC: | 17144 |
UniProt: | Q8TCD5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.16e-14 | 253 |
embryonic cell | 9.78e-14 | 250 |
epithelial cell of nephron | 1.86e-08 | 15 |
mesodermal cell | 2.98e-08 | 121 |
kidney cell | 1.21e-07 | 17 |
kidney epithelial cell | 1.21e-07 | 17 |
kidney cortical cell | 5.69e-07 | 12 |
renal cortical epithelial cell | 5.69e-07 | 12 |
vascular associated smooth muscle cell | 6.78e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.40e-08 | 117 |
nephron epithelium | 1.86e-08 | 15 |
renal tubule | 1.86e-08 | 15 |
nephron tubule | 1.86e-08 | 15 |
nephron | 1.86e-08 | 15 |
uriniferous tubule | 1.86e-08 | 15 |
nephrogenic mesenchyme | 1.86e-08 | 15 |
epithelial vesicle | 6.78e-08 | 78 |
mesenchyme | 1.59e-07 | 160 |
entire embryonic mesenchyme | 1.59e-07 | 160 |
multilaminar epithelium | 1.61e-07 | 83 |
excretory tube | 1.83e-07 | 16 |
kidney epithelium | 1.83e-07 | 16 |
trunk | 2.78e-07 | 199 |
cortex of kidney | 5.69e-07 | 12 |
renal parenchyma | 5.69e-07 | 12 |