FFCP PHASE1:Hg19::chr1:29063305..29063346,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51441 | |EntrezGene=51441 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31675 | |HGNC=31675 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5A9 | |UniProt=Q9Y5A9 | ||
|association_with_transcript=34bp_to_ENST00000373812_5end | |association_with_transcript=34bp_to_ENST00000373812_5end | ||
|cluster_id=chr1:29063305..29063346,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_3_at_YTHDF2_5end | |description=CAGE_peak_3_at_YTHDF2_5end | ||
|id=chr1:29063305..29063346,+ | |id=chr1:29063305..29063346,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.40e-22!254;CL:0002321!7.23e-15!248;CL:0000220!4.38e-14!246;CL:0000548!1.24e-11!679;CL:0000004!1.24e-11!679;CL:0000255!1.24e-11!679;CL:0000012!2.40e-11!682;CL:0002078!1.58e-09!44;CL:0000213!2.33e-09!57;CL:0000215!2.33e-09!57;CL:0002139!4.89e-09!24;CL:0000115!1.63e-08!35;CL:0000063!5.51e-08!578;CL:0000071!5.60e-08!18;CL:0002546!5.60e-08!18;CL:0000222!2.61e-07!119;CL:0000076!2.81e-07!62;CL:0000144!3.97e-07!625 | |ontology_enrichment_celltype=CL:0000066!2.40e-22!254;CL:0002321!7.23e-15!248;CL:0000220!4.38e-14!246;CL:0000548!1.24e-11!679;CL:0000004!1.24e-11!679;CL:0000255!1.24e-11!679;CL:0000012!2.40e-11!682;CL:0002078!1.58e-09!44;CL:0000213!2.33e-09!57;CL:0000215!2.33e-09!57;CL:0002139!4.89e-09!24;CL:0000115!1.63e-08!35;CL:0000063!5.51e-08!578;CL:0000071!5.60e-08!18;CL:0002546!5.60e-08!18;CL:0000222!2.61e-07!119;CL:0000076!2.81e-07!62;CL:0000144!3.97e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.45e-08;24!CL:0000071;1.72e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.32e-22,253;CL:0002321,3.51e-15,250;CL:0002078,5.33e-10,45;CL:0000213,8.34e-10,58;CL:0000215,8.34e-10,58;CL:0002139,4.24e-09,24;CL:0000115,6.41e-09,36;CL:0000071,4.95e-08,18;CL:0002546,4.95e-08,18;CL:0000222,1.58e-07,121;CL:0000076,4.10e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;1.72e-07;18 | |||
|ontology_enrichment_disease=DOID:14566!5.10e-07!239 | |ontology_enrichment_disease=DOID:14566!5.10e-07!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!5.60e-08!18;UBERON:0004638!5.60e-08!18;UBERON:0004852!5.60e-08!18 | |ontology_enrichment_uberon=UBERON:0001986!5.60e-08!18;UBERON:0004638!5.60e-08!18;UBERON:0004852!5.60e-08!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.72e-07;18!UBERON:0001986;1.72e-07;18!UBERON:0004852;1.72e-07;18!UBERON:0001851;6.98e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.95e-08,18;UBERON:0001986,4.95e-08,18;UBERON:0004852,4.95e-08,18;UBERON:0001851,7.68e-07,15 | |||
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| ||
|short_description=p3@YTHDF2 | |short_description=p3@YTHDF2 | ||
}} | }} |
Latest revision as of 10:58, 17 September 2015
Short description: | p3@YTHDF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_YTHDF2_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 34bp_to_ENST00000373812_5end |
EntrezGene: | YTHDF2 |
HGNC: | 31675 |
UniProt: | Q9Y5A9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.32e-22 | 253 |
embryonic cell | 3.51e-15 | 250 |
meso-epithelial cell | 5.33e-10 | 45 |
lining cell | 8.34e-10 | 58 |
barrier cell | 8.34e-10 | 58 |
endothelial cell of vascular tree | 4.24e-09 | 24 |
endothelial cell | 6.41e-09 | 36 |
blood vessel endothelial cell | 4.95e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.95e-08 | 18 |
mesodermal cell | 1.58e-07 | 121 |
squamous epithelial cell | 4.10e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 4.95e-08 | 18 |
endothelium | 4.95e-08 | 18 |
cardiovascular system endothelium | 4.95e-08 | 18 |
cortex | 7.68e-07 | 15 |