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FFCP PHASE1:Hg19::chr1:29213678..29213694,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr1:29213678..29213694,+
|DHSsupport=supported 
|short_description=p4@EPB41
|DPIdataset=robust
|description=CAGE_peak_4_at_EPB41_5end
|association_with_transcript=0bp_to_ENST00000347529_5end
|EntrezGene=2035
|EntrezGene=2035
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=3377
|HGNC=3377
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENST00000347529_5end
|cluster_id=chr1:29213678..29213694,+
|coexpression_cluster_id=C14
|description=CAGE_peak_4_at_EPB41_5end
|id=chr1:29213678..29213694,+
|ontology_enrichment_celltype=CL:0000037!1.04e-12!172;CL:0000566!1.04e-12!172;CL:0000988!2.78e-11!182;CL:0002032!5.31e-11!165;CL:0000837!5.31e-11!165;CL:0000738!6.86e-11!140;CL:0002031!9.35e-09!124;CL:0002087!2.83e-08!119;CL:0000542!6.03e-07!53;CL:0000051!6.03e-07!53
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007023!1.98e-10!115;UBERON:0000178!4.76e-09!15;UBERON:0000179!4.76e-09!15;UBERON:0000463!4.76e-09!15;UBERON:0002390!7.78e-07!102;UBERON:0003061!7.78e-07!102
|ontology_enrichment_uberon_v019=UBERON:0000178;4.16e-12;15!UBERON:0000179;4.16e-12;15!UBERON:0000463;4.16e-12;15
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.31e-12,15;UBERON:0000179,7.31e-12,15;UBERON:0000463,7.31e-12,15;UBERON:0007023,7.58e-10,114
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|short_description=p4@EPB41
}}
}}

Latest revision as of 11:07, 17 September 2015

Short description:p4@EPB41
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_4_at_EPB41_5end
Coexpression cluster:C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen
Association with transcript: 0bp_to_ENST00000347529_5end
EntrezGene:EPB41
HGNC: 3377
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data