FFCP PHASE1:Hg19::chr15:39884950..39884967,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:39884950..39884967,+ to FFCP PHASE1:Hg19::chr15:39884950..39884967,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7057 | |EntrezGene=7057 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11785 | |HGNC=11785 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-278bp_to_ENST00000484734_5end | |||
|cluster_id=chr15:39884950..39884967,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_28_at_THBS1_5end | |||
|id=chr15:39884950..39884967,+ | |||
|ontology_enrichment_celltype=CL:0002371!1.95e-17!591;CL:0000144!3.43e-15!625;CL:0000055!1.02e-14!180;CL:0000548!1.88e-13!679;CL:0000004!1.88e-13!679;CL:0000255!1.88e-13!679;CL:0000057!3.26e-13!75;CL:0000012!5.16e-13!682;CL:0000222!1.09e-12!119;CL:0000220!3.52e-12!246;CL:0002321!8.43e-12!248;CL:0002139!2.72e-09!24;CL:0002620!4.48e-08!23;CL:0000115!5.64e-08!35;CL:0000680!7.46e-08!57;CL:0000056!7.46e-08!57;CL:0000355!7.46e-08!57;CL:0000003!1.03e-07!722;CL:0002078!3.75e-07!44;CL:0000187!5.19e-07!54;CL:0002334!5.96e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.76e-12;23!CL:0002139;1.94e-12;24!CL:0000115;4.39e-09;36!CL:0000071;8.58e-08;18!CL:1000413;2.23e-07;9!CL:0002334;4.73e-07;12!CL:0000057;5.88e-07;73!CL:0002580;8.01e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.17e-17,76;CL:0002620,1.29e-12,23;CL:0002139,1.66e-12,24;CL:0000115,1.95e-10,36;CL:0002078,1.86e-08,45;CL:0000071,7.19e-08,18;CL:0002546,7.19e-08,18;CL:1000413,2.62e-07,9;CL:0002334,4.41e-07,12;CL:0002580,7.89e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;8.58e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;9.90e-09;5!DOID:450;9.90e-09;5!DOID:66;9.90e-09;5!DOID:423;9.90e-09;5!DOID:0080000;9.90e-09;5!DOID:11722;9.90e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.20e-09,5;DOID:450,7.20e-09,5;DOID:66,7.20e-09,5;DOID:423,7.20e-09,5;DOID:0080000,7.20e-09,5;DOID:11722,7.20e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000055!1.42e-13!69;UBERON:0002049!5.03e-12!79;UBERON:0007798!5.03e-12!79;UBERON:0001981!5.18e-12!60;UBERON:0007500!5.18e-12!60;UBERON:0004537!5.18e-12!60;UBERON:0006965!5.18e-12!60;UBERON:0004872!1.29e-10!84;UBERON:0001637!1.76e-10!42;UBERON:0003509!1.76e-10!42;UBERON:0004572!1.76e-10!42;UBERON:0002100!1.91e-10!216;UBERON:0000914!8.96e-10!83;UBERON:0002329!8.96e-10!83;UBERON:0003077!8.96e-10!83;UBERON:0003059!8.96e-10!83;UBERON:0007282!8.96e-10!83;UBERON:0009618!8.96e-10!83;UBERON:0007285!8.96e-10!83;UBERON:0000468!1.53e-09!659;UBERON:0000490!2.16e-09!138;UBERON:0003102!3.04e-09!95;UBERON:0000467!7.48e-09!625;UBERON:0000480!9.86e-09!626;UBERON:0005256!1.50e-08!143;UBERON:0002097!2.14e-08!40;UBERON:0003914!2.24e-08!118;UBERON:0002199!2.31e-08!45;UBERON:0002416!2.31e-08!45;UBERON:0004573!2.68e-08!33;UBERON:0004571!2.68e-08!33;UBERON:0000486!5.33e-08!82;UBERON:0004535!6.23e-08!110;UBERON:0001009!2.79e-07!113;UBERON:0004290!3.56e-07!70;UBERON:0000926!6.90e-07!448;UBERON:0004120!6.90e-07!448;UBERON:0006603!6.90e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;8.47e-11;6!UBERON:0002358;8.47e-11;6!UBERON:0003684;8.47e-11;6!UBERON:0001178;8.47e-11;6!UBERON:0002097;1.00e-10;41!UBERON:0005631;1.84e-08;10!UBERON:0000158;1.84e-08;10!UBERON:0002199;5.63e-08;46!UBERON:0002416;5.63e-08;46!UBERON:0001637;7.93e-08;42!UBERON:0003509;7.93e-08;42!UBERON:0004572;7.93e-08;42!UBERON:0004638;8.58e-08;18!UBERON:0001986;8.58e-08;18!UBERON:0004852;8.58e-08;18!UBERON:0007500;1.67e-07;56!UBERON:0001981;1.67e-07;56!UBERON:0004537;1.67e-07;56!UBERON:0000305;1.87e-07;7!UBERON:0000487;2.22e-07;22!UBERON:0003915;2.23e-07;9!UBERON:0004700;2.23e-07;9!UBERON:0001917;2.23e-07;9!UBERON:0000055;7.09e-07;65!UBERON:0004457;7.71e-07;9!UBERON:0000042;7.71e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.39e-13,41;UBERON:0000055,5.01e-12,68;UBERON:0002199,2.02e-11,46;UBERON:0002416,2.02e-11,46;UBERON:0003688,4.28e-11,6;UBERON:0002358,4.28e-11,6;UBERON:0003684,4.28e-11,6;UBERON:0001178,4.28e-11,6;UBERON:0002049,1.80e-09,78;UBERON:0007798,1.80e-09,78;UBERON:0007500,2.08e-09,59;UBERON:0001981,2.08e-09,59;UBERON:0004537,2.08e-09,59;UBERON:0006965,2.08e-09,59;UBERON:0004871,6.87e-09,8;UBERON:0001637,1.99e-08,42;UBERON:0003509,1.99e-08,42;UBERON:0004572,1.99e-08,42;UBERON:0004923,2.10e-08,66;UBERON:0004872,2.35e-08,83;UBERON:0004638,7.19e-08,18;UBERON:0001986,7.19e-08,18;UBERON:0004852,7.19e-08,18;UBERON:0000487,1.87e-07,22;UBERON:0000305,2.30e-07,7;UBERON:0003915,2.62e-07,9;UBERON:0004700,2.62e-07,9;UBERON:0001917,2.62e-07,9;UBERON:0003102,3.02e-07,99;UBERON:0005631,6.95e-07,14;UBERON:0000158,6.95e-07,14 | |||
|phase1_expression=5.26867299884614,10.0627246228762,1.9733616573436,9.00659685178174,4.91657203870017,9.59572376510406,0,0,0.261185628199839,0.491467873003018,0,1.96597234917155,1.05506791291381,0.123766352960047,0.662794751455832,1.34465029290355,0.602694528023977,2.92124036154949,1.46379839637152,0,0,0,0.286235987131057,0.136874425072884,0.376627918784408,0,0,0,0,0,0.309632246632152,1.83884244895785,0,0.369754010166788,0,0,0,1.10799081706375,0.802177789880567,0,0,0,0,0.581592955118259,0,0,1.39457422143411,0,0,0.28769239232215,0.256160706529101,0.236482229888585,2.06847408441971,0,0,1.50593871634084,0.545812300115692,0,1.53041946185451,0,0.639337125799041,0.989553900560148,0,0,1.45104619314292,0,0,1.25624332628372,0,0.217188844705117,1.21079900526674,0,0,0.211255286311942,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,0.722878304769133,0,0.289693037921647,0,2.43317435151318,0,0.443458794925128,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,1.59009925893364,0,2.42998351125316,3.39184765154406,0,1.10047216776027,1.04497483268405,2.32575083252396,0.35576626268671,1.00416183829401,1.61131726843659,2.28081631715554,0.732186172644509,1.10298924103761,1.62028389576352,1.25019619597712,0.44905874525234,0.675668882899933,0,0,1.83201743930407,0,0,0,9.44246708221105,1.64619665163954,2.1185468930115,1.43418310374407,0,0,2.1349799145941,2.22000793575444,0,0.269421344139376,0.490385709340376,0.302714855289863,0,0,0.312160076830321,0,0.298897361103602,0,0,0,0,0.122834317311768,0.309977343527296,1.18800285728205,6.67620709052104,0,0,0,0,0.554128230968366,1.31693286264251,3.0648779579902,2.55404700141215,0.907457465280168,3.58779271377724,4.27114777637135,2.96704661623387,3.00091096084402,1.54578793857658,2.83404594050192,3.7223371266318,1.35021065793013,1.36411807225678,3.28163906517349,2.30124746605748,2.10139873864455,2.13005755509969,1.61203357164224,1.3564847384839,0.386521706326594,0.818238361772504,0.573609190778008,0,0,0,0,0,0,1.56449532329816,7.07565032012174,4.14404764057442,4.64367928031979,0.721879481669586,0.354920400119532,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0,0,0.38474715694639,0,1.40241773803446,0.8231480226628,0,0,0,0.590789906681404,0,0,0,0.658501712451753,2.24803506515239,0.301586917234893,0.462942225792648,0,0,0,0,0,1.58803092537181,3.70388410061289,3.80508304469197,0.790204397959275,0,0,0,0,1.87467667973554,2.01578553838631,0.992425680696705,0.985143749731331,0.581267877027924,0.766765358330422,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0,0,0,0.387815147273333,0,0.845302752556,1.06375246633948,2.08014873822732,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,1.4377491329495,0,0,0.723906533337896,0.410952645100767,0.716243852959582,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,1.00034104211935,0.271265023699736,3.74347550755453,7.67244651827796,2.36553622550902,2.10854546986884,0.601892199455438,0,0,0.664225598535437,0.921845842708516,1.04260337361699,0,0,0.206768026122887,0,0.213455115606889,0,0,1.20956117331872,7.44323423456331,8.28694655755537,10.9457436828899,2.56278298511402,7.16390148693385,8.04269605718038,4.45254199334973,0.925258162815933,0.532685175939381,0.164254312027618,0,0.116210378459959,0,2.6065841139427,0.184161977871793,0.574072240823034,0.182091168006717,0.524497659837696,0,0,0,0,0,2.27466768141793,0.850468526382578,0.431831832204279,1.54227252690289,0.270946437543853,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,1.14853107599234,0,4.82051789532479,0.193341436584244,0,0.307007349452259,0.689182862422653,0.322260734604821,0.435050081742686,0.0852266274161009,0.356128142586949,0.165284915360978,0.960950336825531,2.93509238737543,0.6069466851333,0,0.94443704049192,0,0.308033580176089,0.532306030317022,0.869932992075073,0.74129687641568,0,0,0.316379424718726,0,0.255897791311334,0,0,0,0.899362287916574,0.274537029736055,0.353437207037059,0.202182481573316,1.58510321173008,0.842516912477962,0,0.487426979262569,4.22600587027022,0.136499911407986,0.848432591722276,0,0.551365343546124,0.66343897524122,2.63070531152258,0,0.655894752046633,0.405820753925408,3.0982349809975,1.40847801266121,0,0.491245205065606,2.1400263088875,0,0,0.329294892959902,0,0.349934720244983,0.577332676353072,0.670302275535787,1.08890984861323,0.0941438007767792,3.44404298136984,0,1.7737206141467,2.06751060186264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.284136146806413,1.43246690842614,0.593929361665277,4.91457123358771,0,0,0,0,0,0,0,0,0.102268682502155,0,1.55519793830904,0.898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0.113942055847001,0,0,0,0.957003479195758,1.28236630762607,1.06606955203727,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0.992975867626496,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| ||
|short_description=p28@THBS1 | |||
}} | }} |
Latest revision as of 11:20, 17 September 2015
Short description: | p28@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_THBS1_5end |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | -278bp_to_ENST00000484734_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.17e-17 | 76 |
skin fibroblast | 1.29e-12 | 23 |
endothelial cell of vascular tree | 1.66e-12 | 24 |
endothelial cell | 1.95e-10 | 36 |
meso-epithelial cell | 1.86e-08 | 45 |
blood vessel endothelial cell | 7.19e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.19e-08 | 18 |
endothelial cell of artery | 2.62e-07 | 9 |
preadipocyte | 4.41e-07 | 12 |
preadipocyte of the breast | 7.89e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.39e-13 | 41 |
vessel | 5.01e-12 | 68 |
integument | 2.02e-11 | 46 |
integumental system | 2.02e-11 | 46 |
omentum | 4.28e-11 | 6 |
peritoneum | 4.28e-11 | 6 |
abdominal cavity | 4.28e-11 | 6 |
visceral peritoneum | 4.28e-11 | 6 |
vasculature | 1.80e-09 | 78 |
vascular system | 1.80e-09 | 78 |
epithelial tube open at both ends | 2.08e-09 | 59 |
blood vessel | 2.08e-09 | 59 |
blood vasculature | 2.08e-09 | 59 |
vascular cord | 2.08e-09 | 59 |
somatic layer of lateral plate mesoderm | 6.87e-09 | 8 |
artery | 1.99e-08 | 42 |
arterial blood vessel | 1.99e-08 | 42 |
arterial system | 1.99e-08 | 42 |
organ component layer | 2.10e-08 | 66 |
splanchnic layer of lateral plate mesoderm | 2.35e-08 | 83 |
blood vessel endothelium | 7.19e-08 | 18 |
endothelium | 7.19e-08 | 18 |
cardiovascular system endothelium | 7.19e-08 | 18 |
simple squamous epithelium | 1.87e-07 | 22 |
amnion | 2.30e-07 | 7 |
endothelial tube | 2.62e-07 | 9 |
arterial system endothelium | 2.62e-07 | 9 |
endothelium of artery | 2.62e-07 | 9 |
surface structure | 3.02e-07 | 99 |
extraembryonic membrane | 6.95e-07 | 14 |
membranous layer | 6.95e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.20e-09 | 5 |
myotonic disease | 7.20e-09 | 5 |
muscle tissue disease | 7.20e-09 | 5 |
myopathy | 7.20e-09 | 5 |
muscular disease | 7.20e-09 | 5 |
myotonic dystrophy | 7.20e-09 | 5 |