FFCP PHASE1:Hg19::chr17:73553913..73553927,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3993 | |EntrezGene=3993 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6629 | |HGNC=6629 | ||
|TSSclassifier=strong | |||
|UniProt=G3V1I9 | |UniProt=G3V1I9 | ||
|association_with_transcript=18bp_to_ENST00000545227_5end | |association_with_transcript=18bp_to_ENST00000545227_5end | ||
|cluster_id=chr17:73553913..73553927,+ | |||
|coexpression_cluster_id=C76 | |coexpression_cluster_id=C76 | ||
|description=CAGE_peak_2_at_LLGL2_5end | |description=CAGE_peak_2_at_LLGL2_5end | ||
|id=chr17:73553913..73553927,+ | |id=chr17:73553913..73553927,+ | ||
|ontology_enrichment_celltype=CL:0000181!6.86e-15!12;CL:0000417!6.86e-15!12;CL:0000668!6.86e-15!12;CL:0000414!6.86e-15!12;CL:0000412!6.86e-15!12;CL:0000182!6.86e-15!12;CL:0000066!6.61e-07!254 | |ontology_enrichment_celltype=CL:0000181!6.86e-15!12;CL:0000417!6.86e-15!12;CL:0000668!6.86e-15!12;CL:0000414!6.86e-15!12;CL:0000412!6.86e-15!12;CL:0000182!6.86e-15!12;CL:0000066!6.61e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.21e-28;12!CL:0000313;6.13e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.55e-28,12;CL:0000313,9.05e-11,1;CL:0000223,2.18e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.64e-14;11!UBERON:0009497;5.08e-12;13!UBERON:0001041;8.24e-08;30 | |||
|ontology_enrichment_disease=DOID:305!4.64e-11!106;DOID:0050687!1.25e-08!143 | |ontology_enrichment_disease=DOID:305!4.64e-11!106;DOID:0050687!1.25e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:2152;6.13e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,9.05e-11,1 | |||
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| ||
|short_description=p2@LLGL2 | |short_description=p2@LLGL2 | ||
}} | }} |
Latest revision as of 11:20, 17 September 2015
Short description: | p2@LLGL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LLGL2_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | 18bp_to_ENST00000545227_5end |
EntrezGene: | LLGL2 |
HGNC: | 6629 |
UniProt: | G3V1I9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.55e-28 | 12 |
serous secreting cell | 9.05e-11 | 1 |
endodermal cell | 2.18e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 4.73e-24 | 19 |
digestive gland | 4.73e-24 | 19 |
liver bud | 4.73e-24 | 19 |
hepatic diverticulum | 1.10e-20 | 22 |
liver primordium | 1.10e-20 | 22 |
digestive tract diverticulum | 9.29e-20 | 23 |
epithelial sac | 3.99e-18 | 25 |
epithelium of foregut-midgut junction | 3.99e-18 | 25 |
anatomical boundary | 3.99e-18 | 25 |
hepatobiliary system | 3.99e-18 | 25 |
foregut-midgut junction | 3.99e-18 | 25 |
septum transversum | 3.99e-18 | 25 |
sac | 2.11e-17 | 26 |
exocrine gland | 1.74e-14 | 31 |
exocrine system | 1.74e-14 | 31 |
abdomen element | 4.66e-13 | 54 |
abdominal segment element | 4.66e-13 | 54 |
endocrine gland | 9.43e-13 | 35 |
endocrine system | 1.10e-12 | 45 |
abdominal segment of trunk | 1.25e-11 | 60 |
abdomen | 1.25e-11 | 60 |
epithelium of female gonad | 9.05e-11 | 1 |
epididymis | 1.46e-10 | 1 |
trunk region element | 1.08e-09 | 101 |
gut epithelium | 5.21e-08 | 54 |
foregut | 1.15e-07 | 87 |
gland | 2.87e-07 | 59 |
subdivision of trunk | 5.22e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 9.05e-11 | 1 |