FFCP PHASE1:Hg19::chr1:2938044..2938088,+: Difference between revisions
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|id=chr1:2938044..2938088,+
|short_description=p1@ACTRT2
|description=CAGE_peak_1_at_ACTRT2_5end
|association_with_transcript=0bp_to_ENST00000378404,NM_080431,uc001...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=140625 | |EntrezGene=140625 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24026 | |HGNC=24026 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TDY3,Q96LK1 | |UniProt=Q8TDY3,Q96LK1 | ||
|association_with_transcript=0bp_to_ENST00000378404,NM_080431,uc001ajz.2_5end | |||
|cluster_id=chr1:2938044..2938088,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_ACTRT2_5end | |||
|id=chr1:2938044..2938088,+ | |||
|ontology_enrichment_celltype=CL:0002535!2.47e-11!2;CL:0000047!7.30e-11!8;CL:0002319!3.23e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002535;5.70e-21;2!CL:0000047;6.96e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,5.70e-21,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;3.22e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,3.22e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0001301!4.22e-21!1;UBERON:0003135!4.59e-17!11;UBERON:0006955!2.47e-11!2;UBERON:0004801!2.47e-11!2;UBERON:0000473!4.43e-11!8;UBERON:0003101!7.41e-09!22;UBERON:0000079!7.41e-09!22;UBERON:0006947!6.34e-08!3;UBERON:0004054!6.34e-08!3;UBERON:0003133!4.97e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;5.70e-21;2!UBERON:0004801;5.70e-21;2!UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22!UBERON:0000002;6.78e-08;6!UBERON:0001560;6.78e-08;6!UBERON:0003133;7.74e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,5.70e-21,2;UBERON:0004801,5.70e-21,2;UBERON:0000473,6.64e-21,8;UBERON:0003135,1.62e-15,11;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22;UBERON:0003133,2.96e-08,48;UBERON:0000002,6.78e-08,6;UBERON:0001560,6.78e-08,6;UBERON:0005156,7.53e-07,59;UBERON:0000990,7.53e-07,59 | |||
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|short_description=p1@ACTRT2 | |||
}} | }} |
Latest revision as of 11:21, 17 September 2015
Short description: | p1@ACTRT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ACTRT2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000378404, NM_080431, uc001ajz.2_5end |
EntrezGene: | ACTRT2 |
HGNC: | 24026 |
UniProt: | Q8TDY3Q96LK1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 5.70e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 5.70e-21 | 2 |
cervix epithelium | 5.70e-21 | 2 |
testis | 6.64e-21 | 8 |
male reproductive organ | 1.62e-15 | 11 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
reproductive organ | 2.96e-08 | 48 |
uterine cervix | 6.78e-08 | 6 |
neck of organ | 6.78e-08 | 6 |
reproductive structure | 7.53e-07 | 59 |
reproductive system | 7.53e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 3.22e-09 | 5 |