FFCP PHASE2:Hg19::chr17:73717624..73717635,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3691 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6158 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=3691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=6158 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 12:02, 17 September 2015
Short description: | p3@ITGB4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ITGB4_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 35bp_to_uc002jpi.3, uc010dgo.2_5end |
EntrezGene: | ITGB4 |
HGNC: | 6158 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@ITGB4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.09e-37 | 253 |
endo-epithelial cell | 3.49e-27 | 42 |
endodermal cell | 2.89e-22 | 58 |
epithelial cell of alimentary canal | 3.69e-16 | 20 |
respiratory epithelial cell | 2.55e-13 | 13 |
squamous epithelial cell | 1.12e-12 | 63 |
general ecto-epithelial cell | 8.22e-10 | 14 |
acinar cell | 3.14e-08 | 5 |
epithelial cell of tracheobronchial tree | 4.94e-08 | 9 |
epithelial cell of lower respiratory tract | 4.94e-08 | 9 |
Showing 1 to 10 of 14 entries
Ontology term | p-value | n |
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endoderm-derived structure | 7.36e-16 | 160 |
endoderm | 7.36e-16 | 160 |
presumptive endoderm | 7.36e-16 | 160 |
respiratory system | 1.09e-11 | 74 |
extraembryonic membrane | 3.42e-11 | 14 |
membranous layer | 3.42e-11 | 14 |
head | 1.31e-09 | 56 |
transitional epithelium | 2.02e-09 | 6 |
digestive system | 7.67e-09 | 145 |
digestive tract | 7.67e-09 | 145 |
Showing 1 to 10 of 22 entries
Ontology term | p-value | n |
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squamous cell carcinoma | 2.20e-14 | 14 |
carcinoma | 1.04e-12 | 106 |
adenocarcinoma | 2.35e-10 | 25 |
cell type cancer | 5.97e-08 | 143 |
Showing 1 to 4 of 4 entries