FFCP PHASE1:Hg19::chr19:35992810..35992815,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93099 | |EntrezGene=93099 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25063 | |HGNC=25063 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000408915,NM_001035516,uc002nzi.3_5end | |association_with_transcript=0bp_to_ENST00000408915,NM_001035516,uc002nzi.3_5end | ||
|cluster_id=chr19:35992810..35992815,- | |||
|coexpression_cluster_id=C1599 | |coexpression_cluster_id=C1599 | ||
|description=CAGE_peak_2_at_DMKN_5end | |description=CAGE_peak_2_at_DMKN_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000622;2.68e-12;5!CL:0000154;3.64e-10;6!CL:0000244;1.59e-09;4!CL:0000731;1.59e-09;4!CL:0002623;4.84e-08;3!CL:0002577;7.60e-07;3 | |ontology_enrichment_celltype_v019=CL:0000622;2.68e-12;5!CL:0000154;3.64e-10;6!CL:0000244;1.59e-09;4!CL:0000731;1.59e-09;4!CL:0002623;4.84e-08;3!CL:0002577;7.60e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000622,2.59e-12,5;CL:0000154,3.55e-10,6;CL:0000244,1.68e-09,4;CL:0000731,1.68e-09,4;CL:0002623,4.74e-08,3;CL:0002577,6.42e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.50e-12!115;UBERON:0000153!3.60e-08!129;UBERON:0007811!3.60e-08!129;UBERON:0000064!9.88e-08!219;UBERON:0000033!5.15e-07!123 | |ontology_enrichment_uberon=UBERON:0007023!1.50e-12!115;UBERON:0000153!3.60e-08!129;UBERON:0007811!3.60e-08!129;UBERON:0000064!9.88e-08!219;UBERON:0000033!5.15e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;3.65e-11;5!UBERON:0005910;3.10e-09;6!UBERON:0001987;1.10e-08;4!UBERON:0000478;1.19e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0000365;3.65e-11;5!UBERON:0005910;3.10e-09;6!UBERON:0001987;1.10e-08;4!UBERON:0000478;1.19e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,4.87e-11,5;UBERON:0005631,2.06e-09,14;UBERON:0000158,2.06e-09,14;UBERON:0005910,3.93e-09,6;UBERON:0001987,9.30e-09,4;UBERON:0004340,9.30e-09,4;UBERON:0007023,7.72e-08,114;UBERON:0006554,8.03e-08,47;UBERON:0003124,1.05e-07,7;UBERON:0000478,1.21e-07,24;UBERON:0001008,1.39e-07,48 | |||
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| ||
|short_description=p2@DMKN | |short_description=p2@DMKN | ||
}} | }} |
Latest revision as of 12:17, 17 September 2015
Short description: | p2@DMKN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DMKN_5end |
Coexpression cluster: | C1599_skin_immature_uterus_salivary_cervix_penis_tongue |
Association with transcript: | 0bp_to_ENST00000408915, NM_001035516, uc002nzi.3_5end |
EntrezGene: | DMKN |
HGNC: | 25063 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 2.59e-12 | 5 |
protein secreting cell | 3.55e-10 | 6 |
transitional epithelial cell | 1.68e-09 | 4 |
urothelial cell | 1.68e-09 | 4 |
acinar cell of salivary gland | 4.74e-08 | 3 |
placental epithelial cell | 6.42e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
urothelium | 4.87e-11 | 5 |
extraembryonic membrane | 2.06e-09 | 14 |
membranous layer | 2.06e-09 | 14 |
transitional epithelium | 3.93e-09 | 6 |
placenta | 9.30e-09 | 4 |
allantois | 9.30e-09 | 4 |
adult organism | 7.72e-08 | 114 |
urinary system structure | 8.03e-08 | 47 |
chorion | 1.05e-07 | 7 |
extraembryonic structure | 1.21e-07 | 24 |
renal system | 1.39e-07 | 48 |