FFCP PHASE1:Hg19::chr1:31218871..31218882,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7805 | |EntrezGene=7805 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29612 | |HGNC=29612 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=193bp_to_ENST00000464569_5end | |association_with_transcript=193bp_to_ENST00000464569_5end | ||
|cluster_id=chr1:31218871..31218882,- | |||
|description=CAGE_peak_9_at_LAPTM5_5end | |description=CAGE_peak_9_at_LAPTM5_5end | ||
|id=chr1:31218871..31218882,- | |id=chr1:31218871..31218882,- | ||
|ontology_enrichment_celltype=CL:0000945!2.53e-13!24;CL:0000826!2.53e-13!24;CL:0000838!3.91e-12!52;CL:0000542!7.74e-12!53;CL:0000051!7.74e-12!53;CL:0000738!2.20e-08!140;CL:0000785!4.22e-08!2;CL:0000955!4.22e-08!2;CL:0000818!4.22e-08!2;CL:0000954!4.22e-08!2;CL:0000816!4.22e-08!2;CL:0000037!4.85e-08!172;CL:0000566!4.85e-08!172;CL:0002031!2.73e-07!124;CL:0000988!2.86e-07!182;CL:0002032!4.53e-07!165;CL:0000837!4.53e-07!165;CL:0002087!6.29e-07!119 | |ontology_enrichment_celltype=CL:0000945!2.53e-13!24;CL:0000826!2.53e-13!24;CL:0000838!3.91e-12!52;CL:0000542!7.74e-12!53;CL:0000051!7.74e-12!53;CL:0000738!2.20e-08!140;CL:0000785!4.22e-08!2;CL:0000955!4.22e-08!2;CL:0000818!4.22e-08!2;CL:0000954!4.22e-08!2;CL:0000816!4.22e-08!2;CL:0000037!4.85e-08!172;CL:0000566!4.85e-08!172;CL:0002031!2.73e-07!124;CL:0000988!2.86e-07!182;CL:0002032!4.53e-07!165;CL:0000837!4.53e-07!165;CL:0002087!6.29e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000946;3.67e-23;1!CL:0000786;3.67e-23;1!CL:0000945;4.27e-23;24!CL:0002535;2.74e-12;2!CL:0000542;8.67e-09;53!CL:0000775;1.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.80e-23,24;CL:0000826,3.80e-23,24;CL:0000946,5.13e-23,1;CL:0000786,5.13e-23,1;CL:0000980,5.13e-23,1;CL:0000838,2.42e-15,52;CL:0000542,4.71e-15,53;CL:0000051,4.71e-15,53;CL:0002535,2.59e-12,2;CL:0000785,3.24e-12,2;CL:0000955,3.24e-12,2;CL:0000818,3.24e-12,2;CL:0000954,3.24e-12,2;CL:0000816,3.24e-12,2;CL:0000775,1.30e-08,3;CL:0000817,1.40e-08,3;CL:0000738,9.19e-08,136;CL:0002087,7.49e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000954;2.74e-12;2!CL:0000051;8.67e-09;53 | |||
|ontology_enrichment_disease=DOID:0060058!2.02e-16!10 | |ontology_enrichment_disease=DOID:0060058!2.02e-16!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.58e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;2.74e-12;2!UBERON:0004801;2.74e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.59e-12,2;UBERON:0004801,2.59e-12,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68109492645493,2.38091709404843,2.75487734597877,0,0,0,0,0,0,0.154934401160603,0.284338464974843,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0.222820913770347,0,0,0,0.640456598628376,0.260118695119756,0,0.276350017785848,0,0,0,0,0.339928028092699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,1.49801404789436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.891547074219827,0,0,0,0,0,0,0,0,0,0,0,1.51159648712566,0,1.96935688737711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06579894587209,0,0,0,0,0.167821586975843,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.412079291905832,0.13480708770837,0,0.592713324460491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988058159489721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15233987555779,0,0,0,0,0,0,0,0,0,0,0.9555033757741,0,0.94808167039636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.940634592723046,0,0,0,0,0,0,0.187967835959707,0,0.499705779624645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0.36757959813938,0,0,0,0,0,0,0,0.258355639344024,0.372448285775147,0,0,0,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68109492645493,2.38091709404843,2.75487734597877,0,0,0,0,0,0,0.154934401160603,0.284338464974843,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0.222820913770347,0,0,0,0.640456598628376,0.260118695119756,0,0.276350017785848,0,0,0,0,0.339928028092699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,1.49801404789436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.891547074219827,0,0,0,0,0,0,0,0,0,0,0,1.51159648712566,0,1.96935688737711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06579894587209,0,0,0,0,0.167821586975843,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.412079291905832,0.13480708770837,0,0.592713324460491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988058159489721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15233987555779,0,0,0,0,0,0,0,0,0,0,0.9555033757741,0,0.94808167039636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.940634592723046,0,0,0,0,0,0,0.187967835959707,0,0.499705779624645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0.36757959813938,0,0,0,0,0,0,0,0.258355639344024,0.372448285775147,0,0,0,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | ||
|short_description=p9@LAPTM5 | |short_description=p9@LAPTM5 | ||
}} | }} |
Latest revision as of 12:18, 17 September 2015
Short description: | p9@LAPTM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LAPTM5_5end |
Coexpression cluster: | NA |
Association with transcript: | 193bp_to_ENST00000464569_5end |
EntrezGene: | LAPTM5 |
HGNC: | 29612 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.80e-23 | 24 |
pro-B cell | 3.80e-23 | 24 |
antibody secreting cell | 5.13e-23 | 1 |
plasma cell | 5.13e-23 | 1 |
plasmablast | 5.13e-23 | 1 |
lymphoid lineage restricted progenitor cell | 2.42e-15 | 52 |
lymphocyte | 4.71e-15 | 53 |
common lymphoid progenitor | 4.71e-15 | 53 |
epithelial cell of cervix | 2.59e-12 | 2 |
mature B cell | 3.24e-12 | 2 |
pre-B-II cell | 3.24e-12 | 2 |
transitional stage B cell | 3.24e-12 | 2 |
small pre-B-II cell | 3.24e-12 | 2 |
immature B cell | 3.24e-12 | 2 |
neutrophil | 1.30e-08 | 3 |
precursor B cell | 1.40e-08 | 3 |
leukocyte | 9.19e-08 | 136 |
nongranular leukocyte | 7.49e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 2.59e-12 | 2 |
cervix epithelium | 2.59e-12 | 2 |