FFCP PHASE1:Hg19::chr15:40707180..40707184,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3712 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6186 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-160bp_to_ENST00000497816,uc001zlr.2_5end | |||
|cluster_id=chr15:40707180..40707184,+ | |||
|description=CAGE_peak_2_at_IVD_5end | |||
|id=chr15:40707180..40707184,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002581;2.97e-19;1!CL:0002591;2.97e-19;1!CL:0002593;2.60e-10;2!CL:0000346;2.71e-07;3!CL:1000428;2.71e-07;3!CL:0002567;2.71e-07;3!CL:0000307;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,1.88e-19,1;CL:0002591,3.91e-19,1;CL:0002593,3.58e-10,2;CL:0002567,2.19e-07,3;CL:0000346,2.79e-07,3;CL:1000428,2.79e-07,3;CL:0000068,3.16e-07,3;CL:0000069,3.16e-07,3;CL:0000307,3.16e-07,3;CL:0000377,3.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;2.71e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;2.60e-10;2!UBERON:0002012;2.60e-10;2!UBERON:0005406;2.60e-10;2!UBERON:0002456;2.60e-10;2!UBERON:0008886;2.60e-10;2!UBERON:0000412;2.71e-07;3!UBERON:0001992;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,2.07e-10,2;UBERON:0000078,2.99e-10,2;UBERON:0007497,2.99e-10,2;UBERON:0003643,2.99e-10,2;UBERON:0003504,2.99e-10,2;UBERON:0003469,2.99e-10,2;UBERON:0003496,2.99e-10,2;UBERON:0002012,2.99e-10,2;UBERON:0008886,2.99e-10,2;UBERON:0007303,2.99e-10,2;UBERON:0002061,2.99e-10,2;UBERON:0005432,2.99e-10,2;UBERON:0004363,2.99e-10,2;UBERON:0002456,3.58e-10,2;UBERON:0000412,2.79e-07,3;UBERON:0001992,2.79e-07,3;UBERON:0004145,2.97e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0.142169232487422,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0,0,0.261958150995425,0,0,0,0,0.132957960518865,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,2.1349799145941,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0.721879481669586,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24803506515239,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0.451199612907412,0.231046011313244,0.784349769176855,1.46139224653261,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0.522870902049801,0.256450125116389,0,0,0,0,0.165018999841176,0,0,0,0.193341436584244,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,1.3940745403212,0.308033580176089,0,0.869932992075073,0.18532421910392,0,0,0,0.190630193923825,0,0.42793898803392,0.95460974377781,0.78494864019923,0,0,0,0.202182481573316,0,0,0,0.243713489631284,1.05650146756755,0,0,1.13008116620243,0,0,0,0.578775534266688,0,0,0.30982349809975,0.563391205064483,0,0,0,0,0,0,0,0.699869440489966,0,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0.540911356951966,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0.296521128680622,0.247127877893006,0.104421949505455,0,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0.171986032471617,0,0,0.0821154570532092,0.193978032976839,0.0882561266915003,0.225980740780532,0,0.19871461170299,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0.138348634936231,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0.0752103283492573,0.40341013740704,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0,0,0.62041277132864,0,0,0.196300467230486,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0.218531143927391,0.253397002022874,0.101988829741982,0,0,0,4.6225005913126,0.803892390468535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p2@IVD | |||
}} |
Latest revision as of 13:20, 17 September 2015
Short description: | p2@IVD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IVD_5end |
Coexpression cluster: | NA |
Association with transcript: | -160bp_to_ENST00000497816, uc001zlr.2_5end |
EntrezGene: | IVD |
HGNC: | 6186 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 1.88e-19 | 1 |
smooth muscle cell of the pulmonary artery | 3.91e-19 | 1 |
smooth muscle cell of the internal thoracic artery | 3.58e-10 | 2 |
light melanocyte | 2.19e-07 | 3 |
hair follicle dermal papilla cell | 2.79e-07 | 3 |
stem cell of epidermis | 2.79e-07 | 3 |
duct epithelial cell | 3.16e-07 | 3 |
branched duct epithelial cell | 3.16e-07 | 3 |
tracheal epithelial cell | 3.16e-07 | 3 |
tracheoblast | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 2.07e-10 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 2.99e-10 | 2 |
developing epithelial placode | 2.99e-10 | 2 |
respiratory system arterial blood vessel | 2.99e-10 | 2 |
respiratory system blood vessel | 2.99e-10 | 2 |
respiratory system artery | 2.99e-10 | 2 |
head blood vessel | 2.99e-10 | 2 |
pulmonary artery | 2.99e-10 | 2 |
pulmonary vascular system | 2.99e-10 | 2 |
pharyngeal vasculature | 2.99e-10 | 2 |
truncus arteriosus | 2.99e-10 | 2 |
aortic sac | 2.99e-10 | 2 |
pharyngeal arch artery | 2.99e-10 | 2 |
internal thoracic artery | 3.58e-10 | 2 |
dermal papilla | 2.79e-07 | 3 |
papillary layer of dermis | 2.79e-07 | 3 |
outflow tract | 2.97e-07 | 3 |