FFCP PHASE1:Hg19::chr1:32041957..32041990,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=64129 | |EntrezGene=64129 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=19168 | |HGNC=19168 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=B4DPK6,Q9GZM7 | |UniProt=B4DPK6,Q9GZM7 | ||
|association_with_transcript=-95bp_to_NM_001204414,NM_022164,uc001bta.2,uc010ogi.1,uc010ogj.1_5end | |association_with_transcript=-95bp_to_NM_001204414,NM_022164,uc001bta.2,uc010ogi.1,uc010ogj.1_5end | ||
|cluster_id=chr1:32041957..32041990,+ | |||
|coexpression_cluster_id=C140 | |coexpression_cluster_id=C140 | ||
|description=CAGE_peak_3_at_TINAGL1_5end | |description=CAGE_peak_3_at_TINAGL1_5end | ||
Latest revision as of 13:33, 17 September 2015
| Short description: | p3@TINAGL1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_TINAGL1_5end |
| Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
| Association with transcript: | -95bp_to_NM_001204414, NM_022164, uc001bta.2, uc010ogi.1, uc010ogj.1_5end |
| EntrezGene: | TINAGL1 |
| HGNC: | 19168 |
| UniProt: | B4DPK6Q9GZM7 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@TINAGL1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endothelial cell | 1.16e-61 | 36 |
| endothelial cell of vascular tree | 1.30e-55 | 24 |
| meso-epithelial cell | 6.66e-54 | 45 |
| blood vessel endothelial cell | 1.21e-40 | 18 |
| embryonic blood vessel endothelial progenitor cell | 1.21e-40 | 18 |
| lining cell | 3.99e-40 | 58 |
| barrier cell | 3.99e-40 | 58 |
| kidney cell | 1.91e-34 | 17 |
| kidney epithelial cell | 1.91e-34 | 17 |
| epithelial cell of nephron | 1.59e-30 | 15 |
Showing 1 to 10 of 30 entries
| Ontology term | p-value | n |
|---|---|---|
| blood vessel endothelium | 1.21e-40 | 18 |
| endothelium | 1.21e-40 | 18 |
| cardiovascular system endothelium | 1.21e-40 | 18 |
| simple squamous epithelium | 2.46e-32 | 22 |
| nephron epithelium | 1.59e-30 | 15 |
| renal tubule | 1.59e-30 | 15 |
| nephron tubule | 1.59e-30 | 15 |
| nephron | 1.59e-30 | 15 |
| uriniferous tubule | 1.59e-30 | 15 |
| nephrogenic mesenchyme | 1.59e-30 | 15 |
Showing 1 to 10 of 69 entries
