FFCP PHASE1:Hg19::chr20:62258402..62258464,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:62258402..62258464,-
|short_description=p1@GMEB2
|description=CAGE_peak_1_at_GMEB2_5end
|association_with_transcript=-8bp_to_ENST00000370077_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26205 | |EntrezGene=26205 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4371 | |HGNC=4371 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UKD1 | |UniProt=Q9UKD1 | ||
|association_with_transcript=-8bp_to_ENST00000370077_5end | |||
|cluster_id=chr20:62258402..62258464,- | |||
|description=CAGE_peak_1_at_GMEB2_5end | |||
|id=chr20:62258402..62258464,- | |||
|ontology_enrichment_celltype=CL:0000738!1.37e-16!140;CL:0002087!1.55e-13!119;CL:0000037!2.54e-13!172;CL:0000566!2.54e-13!172;CL:0000988!1.68e-12!182;CL:0002031!1.97e-12!124;CL:0002032!4.38e-11!165;CL:0000837!4.38e-11!165;CL:0002057!5.86e-11!42;CL:0000860!1.33e-10!45;CL:0000766!4.01e-08!76;CL:0000791!5.63e-08!18;CL:0000789!5.63e-08!18;CL:0002420!5.63e-08!18;CL:0002419!5.63e-08!18;CL:0000790!5.63e-08!18;CL:0000838!3.17e-07!52;CL:0000542!4.26e-07!53;CL:0000051!4.26e-07!53;CL:0002009!6.56e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.46e-09;33!CL:0002057;7.46e-09;33!CL:0000791;5.05e-08;18!CL:0000789;5.05e-08;18!CL:0002419;5.05e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.44e-17,136;CL:0002087,5.15e-14,115;CL:0000037,1.21e-13,168;CL:0000988,4.72e-13,177;CL:0002031,7.46e-13,120;CL:0002032,2.29e-11,161;CL:0000837,2.29e-11,161;CL:0000860,5.86e-11,42;CL:0002057,5.86e-11,42;CL:0000766,1.44e-08,72;CL:0000473,1.44e-08,48;CL:0000234,1.44e-08,48;CL:0000791,5.63e-08,18;CL:0000789,5.63e-08,18;CL:0002420,5.63e-08,18;CL:0002419,5.63e-08,18;CL:0000790,5.63e-08,18;CL:0002009,2.40e-07,61;CL:0000838,3.17e-07,52;CL:0000542,4.26e-07,53;CL:0000051,4.26e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.44e-08;42!CL:0000790;5.05e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.58e-08!102;UBERON:0003061!3.58e-08!102;UBERON:0002193!7.90e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.65e-08,98;UBERON:0003061,1.65e-08,98;UBERON:0002193,4.01e-08,108 | |||
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| ||
|short_description=p1@GMEB2 | |||
}} | }} |
Latest revision as of 13:38, 17 September 2015
Short description: | p1@GMEB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GMEB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENST00000370077_5end |
EntrezGene: | GMEB2 |
HGNC: | 4371 |
UniProt: | Q9UKD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.44e-17 | 136 |
nongranular leukocyte | 5.15e-14 | 115 |
hematopoietic stem cell | 1.21e-13 | 168 |
hematopoietic cell | 4.72e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 7.46e-13 | 120 |
hematopoietic oligopotent progenitor cell | 2.29e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.29e-11 | 161 |
classical monocyte | 5.86e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.86e-11 | 42 |
myeloid leukocyte | 1.44e-08 | 72 |
defensive cell | 1.44e-08 | 48 |
phagocyte | 1.44e-08 | 48 |
mature alpha-beta T cell | 5.63e-08 | 18 |
alpha-beta T cell | 5.63e-08 | 18 |
immature T cell | 5.63e-08 | 18 |
mature T cell | 5.63e-08 | 18 |
immature alpha-beta T cell | 5.63e-08 | 18 |
macrophage dendritic cell progenitor | 2.40e-07 | 61 |
lymphoid lineage restricted progenitor cell | 3.17e-07 | 52 |
lymphocyte | 4.26e-07 | 53 |
common lymphoid progenitor | 4.26e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.65e-08 | 98 |
blood island | 1.65e-08 | 98 |
hemolymphoid system | 4.01e-08 | 108 |