FFCP PHASE1:Hg19::chr12:14996486..14996500,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=420 | |EntrezGene=420 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=726 | |HGNC=726 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q93070 | |UniProt=Q93070 | ||
|association_with_transcript=-57bp_to_ENST00000228936_5end | |association_with_transcript=-57bp_to_ENST00000228936_5end | ||
|cluster_id=chr12:14996486..14996500,- | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_3_at_ART4_5end | |description=CAGE_peak_3_at_ART4_5end | ||
Latest revision as of 13:51, 17 September 2015
| Short description: | p3@ART4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_ART4_5end |
| Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
| Association with transcript: | -57bp_to_ENST00000228936_5end |
| EntrezGene: | ART4 |
| HGNC: | 726 |
| UniProt: | Q93070 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@ART4 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| extraembryonic cell | 3.06e-46 | 19 |
| placental epithelial cell | 1.19e-27 | 3 |
| hepatocyte | 7.80e-27 | 12 |
| amniotic epithelial cell | 5.96e-19 | 2 |
| amnion mesenchymal stem cell | 3.07e-17 | 5 |
| chorionic membrane mesenchymal stem cell | 2.97e-13 | 3 |
Showing 1 to 6 of 6 entries
| Ontology term | p-value | n |
|---|---|---|
| extraembryonic membrane | 3.22e-63 | 14 |
| membranous layer | 3.22e-63 | 14 |
| extraembryonic structure | 5.45e-44 | 24 |
| amnion | 1.86e-32 | 7 |
| chorion | 2.58e-32 | 7 |
| somatic layer of lateral plate mesoderm | 2.11e-28 | 8 |
| liver | 9.43e-23 | 19 |
| digestive gland | 9.43e-23 | 19 |
| liver bud | 9.43e-23 | 19 |
| placenta | 6.50e-21 | 4 |
Showing 1 to 10 of 33 entries
