FFCP PHASE1:Hg19::chr16:68798925..68798936,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=999 | |EntrezGene=999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1748 | |HGNC=1748 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-86bp_to_AK311198_5end | |association_with_transcript=-86bp_to_AK311198_5end | ||
|cluster_id=chr16:68798925..68798936,+ | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_3_at_CDH1_5end | |description=CAGE_peak_3_at_CDH1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000764!2.19e-10!2;CL:0000765!2.19e-10!2;CL:0000050!2.19e-10!2;CL:0000038!2.19e-10!2;CL:0000558!2.19e-10!2;CL:0000547!2.19e-10!2;CL:0000549!2.19e-10!2;CL:0000550!2.19e-10!2;CL:0000552!2.19e-10!2;CL:0000453!5.38e-08!5;CL:0000077!1.19e-07!19;CL:0000990!1.36e-07!8 | |ontology_enrichment_celltype=CL:0000764!2.19e-10!2;CL:0000765!2.19e-10!2;CL:0000050!2.19e-10!2;CL:0000038!2.19e-10!2;CL:0000558!2.19e-10!2;CL:0000547!2.19e-10!2;CL:0000549!2.19e-10!2;CL:0000550!2.19e-10!2;CL:0000552!2.19e-10!2;CL:0000453!5.38e-08!5;CL:0000077!1.19e-07!19;CL:0000990!1.36e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000764;3.99e-41;2!CL:0000558;3.99e-41;2!CL:0002097;3.89e-11;2!CL:0000174;7.50e-08;3 | |ontology_enrichment_celltype_v019=CL:0000764;3.99e-41;2!CL:0000558;3.99e-41;2!CL:0002097;3.89e-11;2!CL:0000174;7.50e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.99e-41,2;CL:0000765,3.99e-41,2;CL:0000050,3.99e-41,2;CL:0000038,3.99e-41,2;CL:0000558,3.99e-41,2;CL:0000547,3.99e-41,2;CL:0000549,3.99e-41,2;CL:0000550,3.99e-41,2;CL:0000552,3.99e-41,2;CL:0002097,4.09e-11,2;CL:0000174,7.76e-08,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.80e-15!7;UBERON:0002106!1.26e-13!3;UBERON:0004854!1.26e-13!3;UBERON:0009034!1.26e-13!3;UBERON:0002095!1.26e-13!3;UBERON:0004782!1.26e-13!3;UBERON:0003281!1.26e-13!3;UBERON:0009664!1.26e-13!3;UBERON:0002296!1.26e-13!3;UBERON:0005602!1.26e-13!3;UBERON:0001179!1.26e-13!3;UBERON:0006293!1.26e-13!3;UBERON:0000178!3.06e-10!15;UBERON:0000179!3.06e-10!15;UBERON:0000463!3.06e-10!15;UBERON:0007023!5.70e-07!115 | |ontology_enrichment_uberon=UBERON:0004177!4.80e-15!7;UBERON:0002106!1.26e-13!3;UBERON:0004854!1.26e-13!3;UBERON:0009034!1.26e-13!3;UBERON:0002095!1.26e-13!3;UBERON:0004782!1.26e-13!3;UBERON:0003281!1.26e-13!3;UBERON:0009664!1.26e-13!3;UBERON:0002296!1.26e-13!3;UBERON:0005602!1.26e-13!3;UBERON:0001179!1.26e-13!3;UBERON:0006293!1.26e-13!3;UBERON:0000178!3.06e-10!15;UBERON:0000179!3.06e-10!15;UBERON:0000463!3.06e-10!15;UBERON:0007023!5.70e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.52e-33;15!UBERON:0000179;5.52e-33;15!UBERON:0000463;5.52e-33;15!UBERON:0002390;1.47e-21;32!UBERON:0002193;1.73e-14;42!UBERON:0002106;5.93e-08;3!UBERON:0002369;7.50e-08;3!UBERON:0001235;7.50e-08;3!UBERON:0006858;7.50e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0000178;5.52e-33;15!UBERON:0000179;5.52e-33;15!UBERON:0000463;5.52e-33;15!UBERON:0002390;1.47e-21;32!UBERON:0002193;1.73e-14;42!UBERON:0002106;5.93e-08;3!UBERON:0002369;7.50e-08;3!UBERON:0001235;7.50e-08;3!UBERON:0006858;7.50e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.90e-33,15;UBERON:0000179,5.90e-33,15;UBERON:0000463,5.90e-33,15;UBERON:0007023,2.61e-08,114;UBERON:0002106,5.93e-08,3;UBERON:0004854,5.93e-08,3;UBERON:0009034,5.93e-08,3;UBERON:0002095,5.93e-08,3;UBERON:0004782,5.93e-08,3;UBERON:0003281,5.93e-08,3;UBERON:0009664,5.93e-08,3;UBERON:0002296,5.93e-08,3;UBERON:0005602,5.93e-08,3;UBERON:0001179,5.93e-08,3;UBERON:0006293,5.93e-08,3;UBERON:0002369,7.76e-08,3;UBERON:0001235,7.76e-08,3;UBERON:0006858,7.76e-08,3;UBERON:0002390,4.13e-07,98;UBERON:0003061,4.13e-07,98 | |||
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| ||
|short_description=p3@CDH1 | |short_description=p3@CDH1 | ||
}} | }} |
Latest revision as of 14:11, 17 September 2015
Short description: | p3@CDH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDH1_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -86bp_to_AK311198_5end |
EntrezGene: | CDH1 |
HGNC: | 1748 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.99e-41 | 2 |
erythroblast | 3.99e-41 | 2 |
megakaryocyte-erythroid progenitor cell | 3.99e-41 | 2 |
erythroid progenitor cell | 3.99e-41 | 2 |
reticulocyte | 3.99e-41 | 2 |
proerythroblast | 3.99e-41 | 2 |
basophilic erythroblast | 3.99e-41 | 2 |
polychromatophilic erythroblast | 3.99e-41 | 2 |
orthochromatic erythroblast | 3.99e-41 | 2 |
cortical cell of adrenal gland | 4.09e-11 | 2 |
steroid hormone secreting cell | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 5.90e-33 | 15 |
haemolymphatic fluid | 5.90e-33 | 15 |
organism substance | 5.90e-33 | 15 |
adult organism | 2.61e-08 | 114 |
spleen | 5.93e-08 | 3 |
gastrointestinal system mesentery | 5.93e-08 | 3 |
stomach region | 5.93e-08 | 3 |
mesentery | 5.93e-08 | 3 |
gastrointestinal system serosa | 5.93e-08 | 3 |
mesentery of stomach | 5.93e-08 | 3 |
gut mesentery | 5.93e-08 | 3 |
dorsal mesentery | 5.93e-08 | 3 |
dorsal mesogastrium | 5.93e-08 | 3 |
peritoneal cavity | 5.93e-08 | 3 |
spleen primordium | 5.93e-08 | 3 |
adrenal gland | 7.76e-08 | 3 |
adrenal cortex | 7.76e-08 | 3 |
adrenal/interrenal gland | 7.76e-08 | 3 |
hematopoietic system | 4.13e-07 | 98 |
blood island | 4.13e-07 | 98 |