FFCP PHASE1:Hg19::chr20:62669224..62669244,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=27655 | |HGNC=27655 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-240bp_to_ENST00000463337_5end | |association_with_transcript=-240bp_to_ENST00000463337_5end | ||
|cluster_id=chr20:62669224..62669244,+ | |||
|coexpression_cluster_id=C4064 | |coexpression_cluster_id=C4064 | ||
|description=CAGE_peak_2_at_LINC00176_5end | |description=CAGE_peak_2_at_LINC00176_5end | ||
|id=chr20:62669224..62669244,+ | |id=chr20:62669224..62669244,+ | ||
|ontology_enrichment_celltype=CL:0002139!8.51e-20!24;CL:0000115!2.65e-16!35;CL:0000071!1.48e-15!18;CL:0002546!1.48e-15!18;CL:0002078!4.92e-15!44;CL:0002543!3.05e-09!6;CL:0000213!8.15e-09!57;CL:0000215!8.15e-09!57 | |ontology_enrichment_celltype=CL:0002139!8.51e-20!24;CL:0000115!2.65e-16!35;CL:0000071!1.48e-15!18;CL:0002546!1.48e-15!18;CL:0002078!4.92e-15!44;CL:0002543!3.05e-09!6;CL:0000213!8.15e-09!57;CL:0000215!8.15e-09!57 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.17e-27;24!CL:0000071;4.89e-24;18!CL:0000115;3.68e-20;36!CL:0002543;1.46e-19;6!CL:0002078;1.18e-11;45!CL:0002144;9.10e-11;3!CL:0002618;1.63e-10;3!CL:0000213;8.92e-10;58!CL:0000215;8.92e-10;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,9.58e-28,24;CL:0000115,1.27e-25,36;CL:0000071,4.97e-24,18;CL:0002546,4.97e-24,18;CL:0002543,9.51e-20,6;CL:0002078,1.40e-19,45;CL:0000213,3.46e-14,58;CL:0000215,3.46e-14,58;CL:0002144,1.04e-10,3;CL:0002618,1.23e-10,3;CL:0000838,3.25e-07,52;CL:0000542,4.97e-07,53;CL:0000051,4.97e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002546;4.89e-24;18!UBERON:0006215;8.95e-11;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.48e-15!18;UBERON:0004638!1.48e-15!18;UBERON:0004852!1.48e-15!18;UBERON:0000487!2.01e-13!22;UBERON:0006914!1.11e-12!25;UBERON:0001638!1.26e-07!9;UBERON:0003920!1.26e-07!9;UBERON:0004582!1.26e-07!9 | |ontology_enrichment_uberon=UBERON:0001986!1.48e-15!18;UBERON:0004638!1.48e-15!18;UBERON:0004852!1.48e-15!18;UBERON:0000487!2.01e-13!22;UBERON:0006914!1.11e-12!25;UBERON:0001638!1.26e-07!9;UBERON:0003920!1.26e-07!9;UBERON:0004582!1.26e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.89e-24;18!UBERON:0001986;4.89e-24;18!UBERON:0004852;4.89e-24;18!UBERON:0000487;3.60e-19;22!UBERON:0006914;1.52e-16;25!UBERON:0001638;7.99e-13;9!UBERON:0003920;7.99e-13;9!UBERON:0004582;7.99e-13;9!UBERON:0000490;8.34e-11;33!UBERON:0010523;9.10e-11;3!UBERON:0001915;9.10e-11;3!UBERON:0001982;9.10e-11;3!UBERON:0002370;1.79e-07;2!UBERON:0005058;1.79e-07;2!UBERON:0009113;1.79e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.97e-24,18;UBERON:0001986,4.97e-24,18;UBERON:0004852,4.97e-24,18;UBERON:0000487,3.65e-19,22;UBERON:0006914,1.53e-16,25;UBERON:0001638,6.06e-13,9;UBERON:0003920,6.06e-13,9;UBERON:0004582,6.06e-13,9;UBERON:0010523,1.04e-10,3;UBERON:0001915,1.04e-10,3;UBERON:0001982,1.04e-10,3;UBERON:0000055,9.74e-09,68;UBERON:0002049,3.61e-07,78;UBERON:0007798,3.61e-07,78 | |||
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| ||
|short_description=p2@LINC00176 | |short_description=p2@LINC00176 | ||
}} | }} |
Latest revision as of 15:07, 17 September 2015
Short description: | p2@LINC00176 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LINC00176_5end |
Coexpression cluster: | C4064_hairy_b_small_cord_breast_adult_mycosis |
Association with transcript: | -240bp_to_ENST00000463337_5end |
EntrezGene: | NA |
HGNC: | 27655 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 9.58e-28 | 24 |
endothelial cell | 1.27e-25 | 36 |
blood vessel endothelial cell | 4.97e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.97e-24 | 18 |
vein endothelial cell | 9.51e-20 | 6 |
meso-epithelial cell | 1.40e-19 | 45 |
lining cell | 3.46e-14 | 58 |
barrier cell | 3.46e-14 | 58 |
capillary endothelial cell | 1.04e-10 | 3 |
endothelial cell of umbilical vein | 1.23e-10 | 3 |
lymphoid lineage restricted progenitor cell | 3.25e-07 | 52 |
lymphocyte | 4.97e-07 | 53 |
common lymphoid progenitor | 4.97e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 4.97e-24 | 18 |
endothelium | 4.97e-24 | 18 |
cardiovascular system endothelium | 4.97e-24 | 18 |
simple squamous epithelium | 3.65e-19 | 22 |
squamous epithelium | 1.53e-16 | 25 |
vein | 6.06e-13 | 9 |
venous blood vessel | 6.06e-13 | 9 |
venous system | 6.06e-13 | 9 |
microcirculatory vessel | 1.04e-10 | 3 |
endothelium of capillary | 1.04e-10 | 3 |
capillary | 1.04e-10 | 3 |
vessel | 9.74e-09 | 68 |
vasculature | 3.61e-07 | 78 |
vascular system | 3.61e-07 | 78 |