FFCP PHASE1:Hg19::chr12:16109643..16109659,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51071 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24269 | |||
|TSSclassifier=strong | |||
|UniProt=G3V158 | |||
|association_with_transcript=121bp_to_ENST00000526530_5end | |||
|cluster_id=chr12:16109643..16109659,+ | |||
|description=CAGE_peak_5_at_DERA_5end | |||
|id=chr12:16109643..16109659,+ | |||
|ontology_enrichment_celltype=CL:0002076!5.73e-23!43;CL:0000066!3.26e-19!254;CL:0000223!1.99e-15!59;CL:0002368!1.18e-11!13;CL:0002621!9.25e-11!3;CL:0002159!5.15e-09!13;CL:0002251!8.23e-09!21;CL:0002327!5.74e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0002541;4.11e-23;3!CL:0002535;1.51e-09;2!CL:0002231;6.88e-07;3!CL:0002166;8.86e-07;3!CL:0002621;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.76e-23,3;CL:0002535,1.44e-09,2;CL:0002231,6.88e-07,3;CL:0002166,7.70e-07,3;CL:0002621,9.64e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!8.41e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.12e-11;14!DOID:4468;1.51e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.12e-11,14;DOID:4468,1.86e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0003729!5.61e-11!5;UBERON:0001949!9.25e-11!3;UBERON:0000344!2.48e-09!12;UBERON:0003343!4.18e-08!4;UBERON:0004785!4.18e-08!4;UBERON:0005631!4.90e-08!14;UBERON:0000158!4.90e-08!14;UBERON:0001911!5.74e-08!4;UBERON:0005333!5.74e-08!4;UBERON:0008425!5.74e-08!4;UBERON:0005311!5.74e-08!4;UBERON:0001004!8.19e-08!72;UBERON:0004119!2.32e-07!169;UBERON:0000925!2.32e-07!169;UBERON:0006595!2.32e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.11e-23;3!UBERON:0000920;4.11e-23;3!UBERON:0006955;1.51e-09;2!UBERON:0004801;1.51e-09;2!UBERON:0005631;1.33e-07;10!UBERON:0000158;1.33e-07;10!UBERON:0001949;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.76e-23,3;UBERON:0003124,2.04e-10,7;UBERON:0006955,1.44e-09,2;UBERON:0004801,1.44e-09,2;UBERON:0001949,9.64e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,0.272746120590835,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,1.20725313949488,0,0.301586917234893,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51183915378974,0.567100388969546,0.179117045405697,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00506470303285,0.368323955743585,0,0,0,0,0.539107359730903,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,1.65284915360978,0.576570202095319,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0.443430153536676,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0.898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83654246567162,0.153900517007594,0,0,0.179515288819544,0,3.82801391678303,0,1.06606955203727,0,0,0,0,0,0,0,0,0,1.14262965711403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,1.30588809870604,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0.961905843018405,0,0,0,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.2203518955441,0,0.366857197043358,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,1.51149313853035,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.407016343054873,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p5@DERA | |||
}} |
Latest revision as of 15:37, 17 September 2015
Short description: | p5@DERA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DERA_5end |
Coexpression cluster: | NA |
Association with transcript: | 121bp_to_ENST00000526530_5end |
EntrezGene: | DERA |
HGNC: | 24269 |
UniProt: | G3V158 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.76e-23 | 3 |
epithelial cell of cervix | 1.44e-09 | 2 |
epithelial cell of prostate | 6.88e-07 | 3 |
epithelial cell of Malassez | 7.70e-07 | 3 |
gingival epithelial cell | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 5.76e-23 | 3 |
chorion | 2.04e-10 | 7 |
uterine epithelium | 1.44e-09 | 2 |
cervix epithelium | 1.44e-09 | 2 |
gingival epithelium | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.12e-11 | 14 |
clear cell adenocarcinoma | 1.86e-09 | 2 |