FFCP PHASE1:Hg19::chr6:30128657..30128681,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10107 | |EntrezGene=10107 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10072 | |HGNC=10072 | ||
|TSSclassifier=strong | |||
|UniProt=C9J8A5,Q9UDY6 | |UniProt=C9J8A5,Q9UDY6 | ||
|association_with_transcript=29bp_to_ENST00000376704,ENST00000376706,ENST00000449742,NM_006778,NM_052828,uc003npn.2,uc003npo.3_5end | |association_with_transcript=29bp_to_ENST00000376704,ENST00000376706,ENST00000449742,NM_006778,NM_052828,uc003npn.2,uc003npo.3_5end | ||
|cluster_id=chr6:30128657..30128681,- | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_2_at_TRIM10_5end | |description=CAGE_peak_2_at_TRIM10_5end | ||
|id=chr6:30128657..30128681,- | |id=chr6:30128657..30128681,- | ||
|ontology_enrichment_celltype=CL:0000764!1.01e-16!2;CL:0000765!1.01e-16!2;CL:0000050!1.01e-16!2;CL:0000038!1.01e-16!2;CL:0000558!1.01e-16!2;CL:0000547!1.01e-16!2;CL:0000549!1.01e-16!2;CL:0000550!1.01e-16!2;CL:0000552!1.01e-16!2 | |ontology_enrichment_celltype=CL:0000764!1.01e-16!2;CL:0000765!1.01e-16!2;CL:0000050!1.01e-16!2;CL:0000038!1.01e-16!2;CL:0000558!1.01e-16!2;CL:0000547!1.01e-16!2;CL:0000549!1.01e-16!2;CL:0000550!1.01e-16!2;CL:0000552!1.01e-16!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.11e-34;2!CL:0000558;1.11e-34;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.11e-34,2;CL:0000765,1.11e-34,2;CL:0000050,1.11e-34,2;CL:0000038,1.11e-34,2;CL:0000558,1.11e-34,2;CL:0000547,1.11e-34,2;CL:0000549,1.11e-34,2;CL:0000550,1.11e-34,2;CL:0000552,1.11e-34,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!5.54e-09!8;DOID:8552!7.75e-09!1;DOID:178!1.42e-08!1;DOID:326!1.42e-08!1;DOID:3978!1.42e-08!1;DOID:3394!1.42e-08!1;DOID:5844!1.42e-08!1 | |ontology_enrichment_disease=DOID:1036!5.54e-09!8;DOID:8552!7.75e-09!1;DOID:178!1.42e-08!1;DOID:326!1.42e-08!1;DOID:3978!1.42e-08!1;DOID:3394!1.42e-08!1;DOID:5844!1.42e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!7.58e-24!15;UBERON:0000179!7.58e-24!15;UBERON:0000463!7.58e-24!15;UBERON:0000341!8.50e-16!2;UBERON:0000974!6.53e-12!10;UBERON:0007023!4.40e-10!115;UBERON:0004177!5.40e-10!7;UBERON:0002370!3.72e-08!4;UBERON:0005058!3.72e-08!4;UBERON:0009113!3.72e-08!4;UBERON:0003295!3.72e-08!4;UBERON:0005562!3.72e-08!4;UBERON:0005057!6.33e-07!26 | |ontology_enrichment_uberon=UBERON:0000178!7.58e-24!15;UBERON:0000179!7.58e-24!15;UBERON:0000463!7.58e-24!15;UBERON:0000341!8.50e-16!2;UBERON:0000974!6.53e-12!10;UBERON:0007023!4.40e-10!115;UBERON:0004177!5.40e-10!7;UBERON:0002370!3.72e-08!4;UBERON:0005058!3.72e-08!4;UBERON:0009113!3.72e-08!4;UBERON:0003295!3.72e-08!4;UBERON:0005562!3.72e-08!4;UBERON:0005057!6.33e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.61e-18;15!UBERON:0000179;6.61e-18;15!UBERON:0000463;6.61e-18;15!UBERON:0002390;7.61e-13;32!UBERON:0000341;1.57e-09;2!UBERON:0002106;9.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.55e-18,15;UBERON:0000179,5.55e-18,15;UBERON:0000463,5.55e-18,15;UBERON:0000341,2.02e-09,2 | |||
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|short_description=p2@TRIM10 | |short_description=p2@TRIM10 | ||
}} | }} |
Latest revision as of 15:42, 17 September 2015
Short description: | p2@TRIM10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRIM10_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 29bp_to_ENST00000376704, ENST00000376706, ENST00000449742, NM_006778, NM_052828, uc003npn.2, uc003npo.3_5end |
EntrezGene: | TRIM10 |
HGNC: | 10072 |
UniProt: | C9J8A5Q9UDY6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.11e-34 | 2 |
erythroblast | 1.11e-34 | 2 |
megakaryocyte-erythroid progenitor cell | 1.11e-34 | 2 |
erythroid progenitor cell | 1.11e-34 | 2 |
reticulocyte | 1.11e-34 | 2 |
proerythroblast | 1.11e-34 | 2 |
basophilic erythroblast | 1.11e-34 | 2 |
polychromatophilic erythroblast | 1.11e-34 | 2 |
orthochromatic erythroblast | 1.11e-34 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 5.55e-18 | 15 |
haemolymphatic fluid | 5.55e-18 | 15 |
organism substance | 5.55e-18 | 15 |
throat | 2.02e-09 | 2 |