FFCP PHASE1:Hg19::chr6:30129053..30129065,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10107 | |EntrezGene=10107 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10072 | |HGNC=10072 | ||
|TSSclassifier=strong | |||
|UniProt=C9J8A5,Q9UDY6 | |UniProt=C9J8A5,Q9UDY6 | ||
|association_with_transcript=-342bp_to_ENST00000376704,ENST00000376706,ENST00000449742,NM_006778,NM_052828,uc003npn.2,uc003npo.3_5end | |association_with_transcript=-342bp_to_ENST00000376704,ENST00000376706,ENST00000449742,NM_006778,NM_052828,uc003npn.2,uc003npo.3_5end | ||
|cluster_id=chr6:30129053..30129065,- | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_4_at_TRIM10_5end | |description=CAGE_peak_4_at_TRIM10_5end | ||
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|ontology_enrichment_celltype=CL:0000764!1.59e-18!2;CL:0000765!1.59e-18!2;CL:0000050!1.59e-18!2;CL:0000038!1.59e-18!2;CL:0000558!1.59e-18!2;CL:0000547!1.59e-18!2;CL:0000549!1.59e-18!2;CL:0000550!1.59e-18!2;CL:0000552!1.59e-18!2 | |ontology_enrichment_celltype=CL:0000764!1.59e-18!2;CL:0000765!1.59e-18!2;CL:0000050!1.59e-18!2;CL:0000038!1.59e-18!2;CL:0000558!1.59e-18!2;CL:0000547!1.59e-18!2;CL:0000549!1.59e-18!2;CL:0000550!1.59e-18!2;CL:0000552!1.59e-18!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;4.49e-30;2!CL:0000558;4.49e-30;2 | |ontology_enrichment_celltype_v019=CL:0000764;4.49e-30;2!CL:0000558;4.49e-30;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.49e-30,2;CL:0000765,4.49e-30,2;CL:0000050,4.49e-30,2;CL:0000038,4.49e-30,2;CL:0000558,4.49e-30,2;CL:0000547,4.49e-30,2;CL:0000549,4.49e-30,2;CL:0000550,4.49e-30,2;CL:0000552,4.49e-30,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.14e-54!15;UBERON:0000179!1.14e-54!15;UBERON:0000463!1.14e-54!15;UBERON:0000341!2.41e-17!2;UBERON:0007023!7.92e-14!115;UBERON:0002390!1.02e-09!102;UBERON:0003061!1.02e-09!102;UBERON:0002193!1.12e-08!112;UBERON:0004535!1.94e-07!110;UBERON:0001009!3.42e-07!113 | |ontology_enrichment_uberon=UBERON:0000178!1.14e-54!15;UBERON:0000179!1.14e-54!15;UBERON:0000463!1.14e-54!15;UBERON:0000341!2.41e-17!2;UBERON:0007023!7.92e-14!115;UBERON:0002390!1.02e-09!102;UBERON:0003061!1.02e-09!102;UBERON:0002193!1.12e-08!112;UBERON:0004535!1.94e-07!110;UBERON:0001009!3.42e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.09e-75;15!UBERON:0000179;4.09e-75;15!UBERON:0000463;4.09e-75;15!UBERON:0002390;6.67e-40;32!UBERON:0002193;5.09e-20;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;4.09e-75;15!UBERON:0000179;4.09e-75;15!UBERON:0000463;4.09e-75;15!UBERON:0002390;6.67e-40;32!UBERON:0002193;5.09e-20;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.75e-75,15;UBERON:0000179,3.75e-75,15;UBERON:0000463,3.75e-75,15;UBERON:0007023,5.50e-14,114;UBERON:0002390,2.89e-13,98;UBERON:0003061,2.89e-13,98;UBERON:0002193,5.93e-12,108;UBERON:0004535,1.16e-09,109;UBERON:0001009,2.24e-09,112 | |||
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|short_description=p4@TRIM10 | |short_description=p4@TRIM10 | ||
}} | }} |
Latest revision as of 15:52, 17 September 2015
Short description: | p4@TRIM10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRIM10_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -342bp_to_ENST00000376704, ENST00000376706, ENST00000449742, NM_006778, NM_052828, uc003npn.2, uc003npo.3_5end |
EntrezGene: | TRIM10 |
HGNC: | 10072 |
UniProt: | C9J8A5Q9UDY6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.49e-30 | 2 |
erythroblast | 4.49e-30 | 2 |
megakaryocyte-erythroid progenitor cell | 4.49e-30 | 2 |
erythroid progenitor cell | 4.49e-30 | 2 |
reticulocyte | 4.49e-30 | 2 |
proerythroblast | 4.49e-30 | 2 |
basophilic erythroblast | 4.49e-30 | 2 |
polychromatophilic erythroblast | 4.49e-30 | 2 |
orthochromatic erythroblast | 4.49e-30 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.75e-75 | 15 |
haemolymphatic fluid | 3.75e-75 | 15 |
organism substance | 3.75e-75 | 15 |
adult organism | 5.50e-14 | 114 |
hematopoietic system | 2.89e-13 | 98 |
blood island | 2.89e-13 | 98 |
hemolymphoid system | 5.93e-12 | 108 |
cardiovascular system | 1.16e-09 | 109 |
circulatory system | 2.24e-09 | 112 |