FFCP PHASE1:Hg19::chr9:70971821..70971841,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5239 | |EntrezGene=5239 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8908 | |HGNC=8908 | ||
|TSSclassifier=strong | |||
|UniProt=E9PBS8,Q15124 | |UniProt=E9PBS8,Q15124 | ||
|association_with_transcript=6bp_to_ENST00000377314,ENST00000396392,ENST00000396396,NM_021965,uc004agr.2_5end | |association_with_transcript=6bp_to_ENST00000377314,ENST00000396392,ENST00000396396,NM_021965,uc004agr.2_5end | ||
|cluster_id=chr9:70971821..70971841,+ | |||
|coexpression_cluster_id=C1040 | |coexpression_cluster_id=C1040 | ||
|description=CAGE_peak_2_at_PGM5_5end | |description=CAGE_peak_2_at_PGM5_5end | ||
|id=chr9:70971821..70971841,+ | |id=chr9:70971821..70971841,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.37e-09;4!UBERON:0007284;1.37e-09;4!UBERON:0007297;4.31e-09;2!UBERON:0006603;1.51e-07;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.91e-39!115;UBERON:0003075!1.77e-09!86;UBERON:0007284!1.77e-09!86;UBERON:0002346!2.74e-09!90;UBERON:0001046!3.43e-08!19;UBERON:0003101!5.59e-08!22;UBERON:0000079!5.59e-08!22;UBERON:0004122!1.67e-07!15;UBERON:0000062!3.32e-07!511;UBERON:0005904!6.98e-07!4 | |ontology_enrichment_uberon=UBERON:0007023!1.91e-39!115;UBERON:0003075!1.77e-09!86;UBERON:0007284!1.77e-09!86;UBERON:0002346!2.74e-09!90;UBERON:0001046!3.43e-08!19;UBERON:0003101!5.59e-08!22;UBERON:0000079!5.59e-08!22;UBERON:0004122!1.67e-07!15;UBERON:0000062!3.32e-07!511;UBERON:0005904!6.98e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0005904;1.80e-16;4!UBERON:0006947;6.00e-13;3!UBERON:0004054;6.00e-13;3!UBERON:0003978;1.25e-12;3!UBERON:0000946;1.25e-12;3!UBERON:0000160;2.61e-10;17!UBERON:0005409;3.96e-10;22!UBERON:0004921;6.28e-10;33!UBERON:0000059;2.18e-09;11!UBERON:0003135;3.84e-09;11!UBERON:0002081;4.31e-09;2!UBERON:0002133;4.31e-09;2!UBERON:0003101;2.36e-08;22!UBERON:0000079;2.36e-08;22!UBERON:0001155;1.33e-07;9!UBERON:0007023;5.21e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.87e-23,114;UBERON:0005904,1.74e-16,4;UBERON:0006947,7.70e-13,3;UBERON:0004054,7.70e-13,3;UBERON:0003978,1.06e-12,3;UBERON:0009751,1.06e-12,3;UBERON:0000946,1.06e-12,3;UBERON:0002523,1.06e-12,3;UBERON:0005983,1.06e-12,3;UBERON:0002165,1.06e-12,3;UBERON:0002062,1.06e-12,3;UBERON:0007280,1.06e-12,3;UBERON:0000160,2.78e-10,17;UBERON:0000059,1.76e-09,11;UBERON:0002133,3.38e-09,2;UBERON:0003135,3.85e-09,11;UBERON:0002081,4.51e-09,2;UBERON:0010227,4.51e-09,2;UBERON:0005409,8.45e-09,25;UBERON:0003101,2.28e-08,22;UBERON:0000079,2.28e-08,22;UBERON:0003064,2.50e-08,28;UBERON:0001155,1.08e-07,9;UBERON:0001046,1.74e-07,19;UBERON:0004122,6.84e-07,15 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.940364164434263,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.785874452986276,0,0,0,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,1.00416183829401,1.20848795132744,1.52054421143703,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,0.34779121492523,0.117408694235822,1.01056513432752,0.462985512576611,3.99533719692656,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0.473107245101804,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.512556597022804,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0.114814448164607,0.364182336013434,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,3.33385162651306,2.29610251989794,0.650756789328606,0.206082023295445,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709522128141196,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0.23874448473769,0,0.307160702099232,0,0.140669416410513,1.00177834520615,0,0,1.79323189425963,1.38141957765574,0,0,0,0,0,0,0,3.84709281984041,0,0,0,0,0,0.260427761085233,0,2.17499872630438,0,0,0,0,0.291604613383254,0,0,0,1.52581736317083,0.331737779793674,0.591095237907095,0.219385397153973,0,0.278847488557207,4.61701551022782,0,0,0,0,0.957003479195758,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0.649165919226273,5.97157158647103,7.16506272477047,1.83309043480088,0,0,0,0.404406797884062,0.802577647298789,0.234264445725339,0,0,0,2.36750641709634,0,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,2.81268147816416,0,0.90392296312213,0.137041924646751,0,0.126621591911757,0,0,3.84215390530835,0,0,0,0.343189995723929,0,0,0,0,0,0.101998217636322,0,0,0.273810757783986,0,0,0,1.67569440763353,1.3749625440701,2.15361907373044,0.199679000498991,1.71690419254628,2.23171457441873,0.53746777989381,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.315222829196793,0.524545881349981,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.533937062838473,0.943225830597996,0.414239055347196,1.48849806543585,0,0,0,0.544017803369474,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0.757612021100357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0.690359926060101,0,1.42899623863589,0.40341013740704,0.781514011233092,0,0,0,0,0,0,0,0,1.09651553371436,3.47347824872506,0,0,0,0,0,0,0.0887023701626388,0,0,0.271878931907327,0.263091094251396,0.118193840883968,2.78078504730173,5.88698196378855,0,0,3.65263488203798,0,0,0.714765441766563,0,0,0,0.801711364730253,0,0,0,0.430227358820278,0,0,2.11693525095465,0,0,0,0,0,0,0,0.821302454849976,0,0.485710993059139,0,0,0,0,0,0,1.15761237161917,1.09279780251979,0,10.7865261571718,0,0,0.594092800654172,0,0,0.0939839179798536,0.257831551894309,0,0,0,0,1.46067277649303,0.458729283404541,0,0,0.0679914901909147,0.436350690340377,0.5290268405154,0,1.84870251452567,0,0,0,5.06794004045748,0,0,0,0,0.606229585745915,0,0,0.103432995861895,0.852935927603924,0.952257725854961,0,0.0620747142958579,0,0.636471582781649,0.606351566874658,1.30630048738177,0,0.134704106029175,0.215166616178029,1.33064142618405,0,0,0,0,0,4.03396765803459,2.03448089157869,3.32878387092756,0.805095174364105,0 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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.940364164434263,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.785874452986276,0,0,0,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,1.00416183829401,1.20848795132744,1.52054421143703,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,0.34779121492523,0.117408694235822,1.01056513432752,0.462985512576611,3.99533719692656,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0.473107245101804,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.512556597022804,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0.114814448164607,0.364182336013434,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,3.33385162651306,2.29610251989794,0.650756789328606,0.206082023295445,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709522128141196,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0.23874448473769,0,0.307160702099232,0,0.140669416410513,1.00177834520615,0,0,1.79323189425963,1.38141957765574,0,0,0,0,0,0,0,3.84709281984041,0,0,0,0,0,0.260427761085233,0,2.17499872630438,0,0,0,0,0.291604613383254,0,0,0,1.52581736317083,0.331737779793674,0.591095237907095,0.219385397153973,0,0.278847488557207,4.61701551022782,0,0,0,0,0.957003479195758,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0.649165919226273,5.97157158647103,7.16506272477047,1.83309043480088,0,0,0,0.404406797884062,0.802577647298789,0.234264445725339,0,0,0,2.36750641709634,0,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,2.81268147816416,0,0.90392296312213,0.137041924646751,0,0.126621591911757,0,0,3.84215390530835,0,0,0,0.343189995723929,0,0,0,0,0,0.101998217636322,0,0,0.273810757783986,0,0,0,1.67569440763353,1.3749625440701,2.15361907373044,0.199679000498991,1.71690419254628,2.23171457441873,0.53746777989381,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.315222829196793,0.524545881349981,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.533937062838473,0.943225830597996,0.414239055347196,1.48849806543585,0,0,0,0.544017803369474,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0.757612021100357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0.690359926060101,0,1.42899623863589,0.40341013740704,0.781514011233092,0,0,0,0,0,0,0,0,1.09651553371436,3.47347824872506,0,0,0,0,0,0,0.0887023701626388,0,0,0.271878931907327,0.263091094251396,0.118193840883968,2.78078504730173,5.88698196378855,0,0,3.65263488203798,0,0,0.714765441766563,0,0,0,0.801711364730253,0,0,0,0.430227358820278,0,0,2.11693525095465,0,0,0,0,0,0,0,0.821302454849976,0,0.485710993059139,0,0,0,0,0,0,1.15761237161917,1.09279780251979,0,10.7865261571718,0,0,0.594092800654172,0,0,0.0939839179798536,0.257831551894309,0,0,0,0,1.46067277649303,0.458729283404541,0,0,0.0679914901909147,0.436350690340377,0.5290268405154,0,1.84870251452567,0,0,0,5.06794004045748,0,0,0,0,0.606229585745915,0,0,0.103432995861895,0.852935927603924,0.952257725854961,0,0.0620747142958579,0,0.636471582781649,0.606351566874658,1.30630048738177,0,0.134704106029175,0.215166616178029,1.33064142618405,0,0,0,0,0,4.03396765803459,2.03448089157869,3.32878387092756,0.805095174364105,0 | ||
|short_description=p2@PGM5 | |short_description=p2@PGM5 | ||
}} | }} |
Latest revision as of 16:09, 17 September 2015
Short description: | p2@PGM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PGM5_5end |
Coexpression cluster: | C1040_smooth_aorta_heart_bladder_uterus_penis_cervix |
Association with transcript: | 6bp_to_ENST00000377314, ENST00000396392, ENST00000396396, NM_021965, uc004agr.2_5end |
EntrezGene: | PGM5 |
HGNC: | 8908 |
UniProt: | E9PBS8Q15124 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.87e-23 | 114 |
duct of male reproductive system | 1.74e-16 | 4 |
male genital duct | 7.70e-13 | 3 |
internal male genitalia | 7.70e-13 | 3 |
valve | 1.06e-12 | 3 |
cardiac mesenchyme | 1.06e-12 | 3 |
cardial valve | 1.06e-12 | 3 |
tunica intima | 1.06e-12 | 3 |
heart layer | 1.06e-12 | 3 |
endocardium | 1.06e-12 | 3 |
endocardial cushion | 1.06e-12 | 3 |
presumptive endocardium | 1.06e-12 | 3 |
intestine | 2.78e-10 | 17 |
large intestine | 1.76e-09 | 11 |
atrioventricular valve | 3.38e-09 | 2 |
male reproductive organ | 3.85e-09 | 11 |
cardiac atrium | 4.51e-09 | 2 |
future cardiac atrium | 4.51e-09 | 2 |
gastrointestinal system | 8.45e-09 | 25 |
male organism | 2.28e-08 | 22 |
male reproductive system | 2.28e-08 | 22 |
intermediate mesoderm | 2.50e-08 | 28 |
colon | 1.08e-07 | 9 |
hindgut | 1.74e-07 | 19 |
genitourinary system | 6.84e-07 | 15 |