FFCP PHASE1:Hg19::chr9:71155795..71155800,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:71155795..71155800,-
|short_description=p1@C9orf71
|description=CAGE_peak_1_at_C9orf71_5end
|association_with_transcript=-12bp_to_ENST00000377311,NM_153237...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=169693 | |EntrezGene=169693 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28537 | |HGNC=28537 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N6L7 | |UniProt=Q8N6L7 | ||
|association_with_transcript=-12bp_to_ENST00000377311,NM_153237,uc004agt.2_5end | |||
|cluster_id=chr9:71155795..71155800,- | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_1_at_C9orf71_5end | |||
|id=chr9:71155795..71155800,- | |||
|ontology_enrichment_celltype=CL:0002541!2.24e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.45e-24;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.45e-24,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.71e-19;1!UBERON:0003918;2.53e-08;10!UBERON:0007687;2.53e-08;10!UBERON:0005795;3.76e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001155!1.89e-11!9;UBERON:0007023!3.30e-10!115;UBERON:0000160!3.43e-10!27;UBERON:0005409!5.09e-10!35;UBERON:0000059!2.19e-09!11;UBERON:0000476!2.24e-09!3;UBERON:0000920!2.24e-09!3;UBERON:0003124!1.09e-08!7;UBERON:0006834!9.71e-08!1;UBERON:0001301!1.83e-07!1;UBERON:0004921!1.99e-07!129;UBERON:0004185!1.99e-07!129;UBERON:0002372!4.61e-07!1;UBERON:0001961!4.61e-07!1;UBERON:0001744!4.61e-07!1;UBERON:0001735!4.61e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.45e-24;3!UBERON:0000920;1.45e-24;3!UBERON:0006834;2.71e-19;1!UBERON:0000160;2.16e-16;17!UBERON:0002108;2.17e-15;4!UBERON:0005409;6.50e-13;22!UBERON:0001155;5.20e-09;9!UBERON:0004921;8.60e-09;33!UBERON:0005631;4.66e-08;10!UBERON:0000158;4.66e-08;10!UBERON:0000059;1.56e-07;11!UBERON:0000478;2.62e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.45e-24,3;UBERON:0003124,1.82e-23,7;UBERON:0006834,2.71e-19,1;UBERON:0000160,2.07e-16,17;UBERON:0002108,2.17e-15,4;UBERON:0005631,4.33e-12,14;UBERON:0000158,4.33e-12,14;UBERON:0005409,1.78e-11,25;UBERON:0001155,5.00e-09,9;UBERON:0000059,1.51e-07,11;UBERON:0000478,2.68e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20898734969396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,1.27600463892768,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0.865554558968364,2.98578579323551,0.530745387020035,4.27721101453538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,60.049948961989,34.4102098165588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04015451374069,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,7.64024165268652,1.5299169235277,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,2.07810455110873,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20898734969396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,1.27600463892768,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0.865554558968364,2.98578579323551,0.530745387020035,4.27721101453538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,60.049948961989,34.4102098165588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04015451374069,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,7.64024165268652,1.5299169235277,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,2.07810455110873,0,0,0,0 | ||
|short_description=p1@C9orf71 | |||
}} | }} |
Latest revision as of 16:14, 17 September 2015
Short description: | p1@C9orf71 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C9orf71_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | -12bp_to_ENST00000377311, NM_153237, uc004agt.2_5end |
EntrezGene: | C9orf71 |
HGNC: | 28537 |
UniProt: | Q8N6L7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.45e-24 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.45e-24 | 3 |
chorion | 1.82e-23 | 7 |
uterus or analog | 2.71e-19 | 1 |
intestine | 2.07e-16 | 17 |
small intestine | 2.17e-15 | 4 |
extraembryonic membrane | 4.33e-12 | 14 |
membranous layer | 4.33e-12 | 14 |
gastrointestinal system | 1.78e-11 | 25 |
colon | 5.00e-09 | 9 |
large intestine | 1.51e-07 | 11 |
extraembryonic structure | 2.68e-07 | 24 |