FFCP PHASE1:Hg19::chr8:25316737..25316787,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=157313 | |EntrezGene=157313 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14623 | |HGNC=14623 | ||
|TSSclassifier=strong | |||
|UniProt=E9PEI0 | |UniProt=E9PEI0 | ||
|association_with_transcript=22bp_to_ENST00000380665,ENST00000518225_5end | |association_with_transcript=22bp_to_ENST00000380665,ENST00000518225_5end | ||
|cluster_id=chr8:25316737..25316787,+ | |||
|coexpression_cluster_id=C109 | |coexpression_cluster_id=C109 | ||
|description=CAGE_peak_1_at_CDCA2_5end | |description=CAGE_peak_1_at_CDCA2_5end | ||
|id=chr8:25316737..25316787,+ | |id=chr8:25316737..25316787,+ | ||
|ontology_enrichment_celltype=CL:0002319;5.72e-07;25 | |ontology_enrichment_celltype=CL:0000548!1.40e-16!679;CL:0000004!1.40e-16!679;CL:0000255!1.40e-16!679;CL:0000012!2.71e-16!682;CL:0000066!2.10e-13!254;CL:0002321!4.89e-10!248;CL:0000220!1.69e-09!246;CL:0000055!6.40e-09!180;CL:0000003!1.75e-08!722;CL:0000333!1.45e-07!41;CL:0000133!4.13e-07!59;CL:0002319!7.72e-07!25 | ||
| | |ontology_enrichment_celltype_v019=CL:0002319;5.72e-07;25 | ||
|ontology_enrichment_disease=DOID:1240;7.04e-14;39!DOID:2531;1.16e-13;51!DOID:0060083;1.16e-13;51!DOID:8692;1.60e-13;31 | |ontology_enrichment_celltype_v019_2=CL:0000066,5.99e-13,253;CL:0002321,4.60e-09,250;CL:0000333,8.69e-08,41;CL:0000133,4.67e-07,59;CL:0002319,5.73e-07,25 | ||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.26e-48!235;DOID:14566!1.08e-47!239;DOID:0050686!5.69e-27!137;DOID:2531!5.41e-22!51;DOID:0060083!5.41e-22!51;DOID:0050687!8.37e-21!143;DOID:1240!1.08e-17!39;DOID:305!1.97e-15!106;DOID:8692!1.06e-13!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;7.04e-14;39!DOID:2531;1.16e-13;51!DOID:0060083;1.16e-13;51!DOID:8692;1.60e-13;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.91e-48,235;DOID:14566,1.46e-46,239;DOID:0050686,3.63e-26,137;DOID:2531,1.72e-22,51;DOID:0060083,1.72e-22,51;DOID:0050687,2.64e-20,143;DOID:1240,4.37e-18,39;DOID:305,2.65e-15,106;DOID:8692,5.38e-14,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,1.49870366723688,0.140954404095971,1.0007329835313,0,0,0,0,0,5.40614660303319,4.18680700783456,10.4851858622483,3.69273769519835,2.59909341216098,0.994192127183747,0.672325146451775,1.80808358407193,0.730310090387373,1.95173119516203,10.5884109946038,8.16002764977012,3.44800193625897,26.6199468031883,30.9336200664718,32.0133730966747,22.6183681013936,24.5480762455338,27.1552195532193,0,0,0.619264493264304,7.35536979583142,8.73497164456925,2.21852406100073,34.0081010547524,15.0699386436667,3.52320527201817,0,0.200544447470142,0,0.223915474239924,0,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,1.21079900526674,0,0,0,0,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0,0.889509253863555,1.28019066769952,0,0.574752439954483,0.661044872784862,0,0,0,0,0,0.560508562981536,10.271979306228,0,0.786021525498329,0.205601498999509,1.83905144929746,0,0,0,8.91283655081389,0.883817722424512,0.221533894583621,0,8.71020974134591,7.02320476823343,16.4437904603676,12.1594007825773,11.5921234294021,0,0,0,16.4298546911471,0.383220493601921,0,0,0,0.651083453856419,0,0.301150238155546,0.383959833463255,0,0.473554504088034,0,0.201606743224732,0,0.289648807765598,0,7.37770945674,8.95037932904712,28.5536930383807,1.50401373190767,2.60723734129483,5.5670016293577,2.91980922181582,20.9867294104231,5.76496433402666,7.99296549807447,2.48860243445654,4.00724817121796,8.52804218404188,0,0.348259474598534,0.132957960518865,0,0,0,9.54059555360184,3.4409383804245,7.28995053375948,7.91431118693613,2.51699661725944,9.35401342596229,9.8227634272301,0.775250277507987,2.49036383880697,4.35136796594071,5.23678112241891,3.04108842287405,4.14905497831888,13.971197053143,4.0507097394088,19.5566404942135,28.0661715782712,23.9862453429476,10.7321646226118,10.4419222552494,10.808902891894,0,0,2.61656431285521,0.496971951695318,11.0168545148184,0.529636723252875,16.0628507619336,14.1867352879343,5.04609840128076,4.2699598291882,1.97334038733728,12.7596524513904,6.87024427555409,16.019266505119,4.38936540170301,0.576175924479999,10.3101430006871,2.18512053781224,10.8389646093445,4.33401173600223,18.9069542816461,23.7953228221153,22.8934814924665,6.32877930890169,18.7936505487005,4.64966015290945,2.37600571456411,3.4617370098998,5.46096817162816,2.15585442544872,24.2404004093855,28.2767854910639,23.8275139316397,14.0472838681868,4.90380473278431,4.8076178850111,13.9521585286826,27.4466142603959,1.06778694409284,4.87443372666992,24.0072876867522,10.3052529238439,4.12224864073007,2.41951913231067,36.6244640963548,15.1027357999858,19.1849668425527,2.48534726334208,3.39456719319505,12.7803453305981,16.3218399128777,14.0735291617705,3.09217365061275,8.72787585890671,7.4569194801141,23.2969778707527,25.8433048226896,18.9396126877315,17.9333625176591,19.1763846665478,36.497735907583,4.69348596989448,3.85944562915731,16.5761905622977,0.464367928031979,2.16563844500876,16.681258805618,16.6898843177321,19.0398713607951,14.6690983734084,13.944284421914,17.5580258142211,8.89886633857085,12.3619523028968,8.84918460976698,5.16708818237254,2.80483547606892,2.8810180793198,0,0,0,0,46.3536254385383,13.2827513626563,8.23525489432923,2.08525542276389,3.37205259772859,11.7618897721608,8.98107918037737,7.16778271682714,3.11980435583874,7.21656710126366,11.2452492825825,1.99594780200897,3.89789408954899,3.24089858803628,4.94660795809955,8.69224837755203,6.86788929675898,1.23108503043699,3.97807250736704,8.02608276359133,0.93733833986777,2.51973192298289,6.52165447314978,15.7622999957013,25.8664205277426,19.5525166374258,19.7065295158377,9.42118243941519,0.414656231081544,0.144119953416961,0.37872730027914,15.6839798901658,6.49380323449072,9.37739577680376,5.13217338068116,6.78661451841935,14.416466776508,3.71574362419752,14.5770409648969,8.7192013766656,25.008355464944,0.258543431515556,0,12.67954128834,1.86156681609409,2.08014873822732,10.80270971901,4.25547396069835,7.45982101245078,2.85955987316295,0,5.76268235746538,15.961073030393,3.19852753868291,16.630989331602,0.301439377059586,0,2.39935178836937,0,0,2.10833939483032,3.59437283237374,0,35.6592262601796,5.35690834670043,6.57524232161227,11.6389626105932,25.7795831185113,0.394061520403854,0,0.128343036279748,8.89331184778622,6.50699269288109,3.09315525111078,6.36561808270525,5.10351001322531,0,2.99161459204025,0,0.981531933753119,1.50051156317903,2.71265023699736,0.831883446123229,3.7470087647404,2.83864347061082,4.56851518471581,0.300946099727719,0,2.0694614258501,11.9560607736379,11.799626786669,12.0768224110635,0.979005787313703,0.343143423810856,0,0.647142602455851,0,2.72814814301633,16.6435439510497,5.74541557326393,0,2.60885354589706,1.40330047216537,0,2.04682899626681,0,0,13.7246627484363,8.5229628150301,15.0292695505271,11.4235974420397,11.6210378459959,10.7564910136544,1.80455823272956,0.0920809889358963,17.222167224691,22.2151224968195,0.786746489756545,6.31679458070376,9.01079444121653,5.49044838423799,4.38417673959782,10.0274047448232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| ||
|short_description=p1@CDCA2 | |short_description=p1@CDCA2 | ||
}} | }} |
Latest revision as of 16:40, 17 September 2015
Short description: | p1@CDCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDCA2_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 22bp_to_ENST00000380665, ENST00000518225_5end |
EntrezGene: | CDCA2 |
HGNC: | 14623 |
UniProt: | E9PEI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.99e-13 | 253 |
embryonic cell | 4.60e-09 | 250 |
migratory neural crest cell | 8.69e-08 | 41 |
neurectodermal cell | 4.67e-07 | 59 |
neural cell | 5.73e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.91e-48 | 235 |
disease of cellular proliferation | 1.46e-46 | 239 |
organ system cancer | 3.63e-26 | 137 |
hematologic cancer | 1.72e-22 | 51 |
immune system cancer | 1.72e-22 | 51 |
cell type cancer | 2.64e-20 | 143 |
leukemia | 4.37e-18 | 39 |
carcinoma | 2.65e-15 | 106 |
myeloid leukemia | 5.38e-14 | 31 |