FFCP PHASE1:Hg19::chr6:30684973..30685033,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9656 | |EntrezGene=9656 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21163 | |HGNC=21163 | ||
|TSSclassifier=strong | |||
|UniProt=F8W1C2 | |UniProt=F8W1C2 | ||
|association_with_transcript=0bp_to_ENST00000422104,uc003nri.2,uc011dmp.1_5end | |association_with_transcript=0bp_to_ENST00000422104,uc003nri.2,uc011dmp.1_5end | ||
|cluster_id=chr6:30684973..30685033,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_MDC1_5end | |description=CAGE_peak_3_at_MDC1_5end | ||
|id=chr6:30684973..30685033,- | |id=chr6:30684973..30685033,- | ||
|ontology_enrichment_celltype=CL:0000066!2.93e-10!254;CL:0000542!1.28e-08!53;CL:0000051!1.28e-08!53;CL:0000063!1.73e-08!578;CL:0000012!2.49e-08!682;CL:0000838!3.23e-08!52;CL:0000548!5.33e-08!679;CL:0000004!5.33e-08!679;CL:0000255!5.33e-08!679;CL:0000076!2.73e-07!62 | |ontology_enrichment_celltype=CL:0000066!2.93e-10!254;CL:0000542!1.28e-08!53;CL:0000051!1.28e-08!53;CL:0000063!1.73e-08!578;CL:0000012!2.49e-08!682;CL:0000838!3.23e-08!52;CL:0000548!5.33e-08!679;CL:0000004!5.33e-08!679;CL:0000255!5.33e-08!679;CL:0000076!2.73e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.61e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.08e-10,53;CL:0000051,2.08e-10,53;CL:0000838,7.47e-10,52;CL:0000945,5.84e-09,24;CL:0000826,5.84e-09,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.09e-28!235;DOID:14566!6.20e-28!239;DOID:2531!3.90e-17!51;DOID:0060083!3.90e-17!51;DOID:0050686!3.65e-15!137;DOID:305!8.41e-13!106;DOID:0050687!9.27e-13!143;DOID:1240!8.68e-12!39;DOID:8692!3.78e-08!31;DOID:0060058!9.51e-07!10 | |ontology_enrichment_disease=DOID:162!1.09e-28!235;DOID:14566!6.20e-28!239;DOID:2531!3.90e-17!51;DOID:0060083!3.90e-17!51;DOID:0050686!3.65e-15!137;DOID:305!8.41e-13!106;DOID:0050687!9.27e-13!143;DOID:1240!8.68e-12!39;DOID:8692!3.78e-08!31;DOID:0060058!9.51e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:2531;1.02e-12;51!DOID:0060083;1.02e-12;51!DOID:1240;8.39e-11;39!DOID:0060058;1.06e-08;10!DOID:8692;2.01e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,3.28e-24,239;DOID:162,4.72e-24,235;DOID:2531,9.05e-21,51;DOID:0060083,9.05e-21,51;DOID:1240,6.65e-14,39;DOID:0050686,7.17e-14,137;DOID:0050687,5.90e-10,143;DOID:305,1.95e-09,106;DOID:0060058,4.12e-09,10;DOID:8692,6.54e-09,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.52e-08;9!UBERON:0001557;2.52e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.83e-08,9 | |||
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| ||
|short_description=p3@MDC1 | |short_description=p3@MDC1 | ||
}} | }} |
Latest revision as of 17:55, 17 September 2015
Short description: | p3@MDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MDC1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000422104, uc003nri.2, uc011dmp.1_5end |
EntrezGene: | MDC1 |
HGNC: | 21163 |
UniProt: | F8W1C2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.08e-10 | 53 |
common lymphoid progenitor | 2.08e-10 | 53 |
lymphoid lineage restricted progenitor cell | 7.47e-10 | 52 |
lymphocyte of B lineage | 5.84e-09 | 24 |
pro-B cell | 5.84e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.83e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 3.28e-24 | 239 |
cancer | 4.72e-24 | 235 |
hematologic cancer | 9.05e-21 | 51 |
immune system cancer | 9.05e-21 | 51 |
leukemia | 6.65e-14 | 39 |
organ system cancer | 7.17e-14 | 137 |
cell type cancer | 5.90e-10 | 143 |
carcinoma | 1.95e-09 | 106 |
lymphoma | 4.12e-09 | 10 |
myeloid leukemia | 6.54e-09 | 31 |