FFCP PHASE1:Hg19::chr5:35047946..35047955,-: Difference between revisions
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|id=chr5:35047946..35047955,-
|short_description=p3@AGXT2
|description=CAGE_peak_3_at_AGXT2_5end
|association_with_transcript=39bp_to_ENST00000505542_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64902 | |EntrezGene=64902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14412 | |HGNC=14412 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=39bp_to_ENST00000505542_5end | |||
|cluster_id=chr5:35047946..35047955,- | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_3_at_AGXT2_5end | |||
|id=chr5:35047946..35047955,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.55e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.75e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;3.49e-12;31!UBERON:0003918;6.93e-10;10!UBERON:0007687;6.93e-10;10!UBERON:0004161;6.10e-09;11!UBERON:0009497;1.05e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002135!1.44e-17!1;UBERON:0005172!2.04e-14!55;UBERON:0005173!2.04e-14!55;UBERON:0002107!2.53e-14!19;UBERON:0006925!2.53e-14!19;UBERON:0008836!2.53e-14!19;UBERON:0002417!5.81e-13!61;UBERON:0000916!5.81e-13!61;UBERON:0008835!2.04e-12!22;UBERON:0003894!2.04e-12!22;UBERON:0009854!6.85e-12!23;UBERON:0007499!5.78e-11!25;UBERON:0009497!5.78e-11!25;UBERON:0000015!5.78e-11!25;UBERON:0002423!5.78e-11!25;UBERON:0006235!5.78e-11!25;UBERON:0004161!5.78e-11!25;UBERON:0005057!1.49e-10!26;UBERON:0009856!1.49e-10!26;UBERON:0002133!1.86e-09!2;UBERON:0002365!6.74e-09!31;UBERON:0002330!6.74e-09!31;UBERON:0002368!6.56e-08!35;UBERON:0005177!3.35e-07!107;UBERON:0009569!8.59e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.99e-19;19!UBERON:0006925;6.99e-19;19!UBERON:0002423;1.82e-14;25!UBERON:0002365;1.22e-11;31!UBERON:0002330;1.22e-11;31!UBERON:0005172;2.40e-11;52!UBERON:0005173;2.40e-11;52!UBERON:0002368;7.85e-10;33!UBERON:0002417;1.74e-08;58!UBERON:0000916;1.74e-08;58!UBERON:0000949;3.46e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.99e-19,19;UBERON:0006925,6.99e-19,19;UBERON:0008836,6.99e-19,19;UBERON:0008835,2.25e-16,22;UBERON:0003894,2.25e-16,22;UBERON:0009854,1.10e-15,23;UBERON:0005172,1.01e-14,54;UBERON:0005173,1.01e-14,54;UBERON:0007499,1.82e-14,25;UBERON:0009497,1.82e-14,25;UBERON:0000015,1.82e-14,25;UBERON:0002423,1.82e-14,25;UBERON:0006235,1.82e-14,25;UBERON:0004161,1.82e-14,25;UBERON:0009856,6.31e-14,26;UBERON:0002417,2.97e-13,60;UBERON:0000916,2.97e-13,60;UBERON:0002365,9.49e-12,31;UBERON:0002330,9.49e-12,31;UBERON:0002368,1.88e-10,35;UBERON:0000949,3.30e-08,45;UBERON:0005177,7.38e-08,101;UBERON:0009569,4.47e-07,112;UBERON:0003929,6.83e-07,54 | |||
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|short_description=p3@AGXT2 | |||
}} | }} |
Latest revision as of 18:01, 17 September 2015
Short description: | p3@AGXT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AGXT2_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 39bp_to_ENST00000505542_5end |
EntrezGene: | AGXT2 |
HGNC: | 14412 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.75e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 6.99e-19 | 19 |
digestive gland | 6.99e-19 | 19 |
liver bud | 6.99e-19 | 19 |
hepatic diverticulum | 2.25e-16 | 22 |
liver primordium | 2.25e-16 | 22 |
digestive tract diverticulum | 1.10e-15 | 23 |
abdomen element | 1.01e-14 | 54 |
abdominal segment element | 1.01e-14 | 54 |
epithelial sac | 1.82e-14 | 25 |
epithelium of foregut-midgut junction | 1.82e-14 | 25 |
anatomical boundary | 1.82e-14 | 25 |
hepatobiliary system | 1.82e-14 | 25 |
foregut-midgut junction | 1.82e-14 | 25 |
septum transversum | 1.82e-14 | 25 |
sac | 6.31e-14 | 26 |
abdominal segment of trunk | 2.97e-13 | 60 |
abdomen | 2.97e-13 | 60 |
exocrine gland | 9.49e-12 | 31 |
exocrine system | 9.49e-12 | 31 |
endocrine gland | 1.88e-10 | 35 |
endocrine system | 3.30e-08 | 45 |
trunk region element | 7.38e-08 | 101 |
subdivision of trunk | 4.47e-07 | 112 |
gut epithelium | 6.83e-07 | 54 |