FFCP PHASE1:Hg19::chr5:35047966..35047975,-: Difference between revisions
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|id=chr5:35047966..35047975,-
|short_description=p4@AGXT2
|description=CAGE_peak_4_at_AGXT2_5end
|association_with_transcript=19bp_to_ENST00000505542_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64902 | |EntrezGene=64902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14412 | |HGNC=14412 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_ENST00000505542_5end | |||
|cluster_id=chr5:35047966..35047975,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_AGXT2_5end | |||
|id=chr5:35047966..35047975,- | |||
|ontology_enrichment_celltype=CL:0000181!4.57e-07!12;CL:0000417!4.57e-07!12;CL:0000668!4.57e-07!12;CL:0000414!4.57e-07!12;CL:0000412!4.57e-07!12;CL:0000182!4.57e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.44e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.44e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.31e-13;31!UBERON:0003918;6.60e-11;10!UBERON:0007687;6.60e-11;10!UBERON:0004161;6.34e-10;11!UBERON:0009497;1.53e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!5.62e-19!1;UBERON:0005172!8.17e-16!55;UBERON:0005173!8.17e-16!55;UBERON:0002107!1.15e-15!19;UBERON:0006925!1.15e-15!19;UBERON:0008836!1.15e-15!19;UBERON:0002417!3.12e-14!61;UBERON:0000916!3.12e-14!61;UBERON:0008835!1.39e-13!22;UBERON:0003894!1.39e-13!22;UBERON:0009854!5.23e-13!23;UBERON:0007499!5.38e-12!25;UBERON:0009497!5.38e-12!25;UBERON:0000015!5.38e-12!25;UBERON:0002423!5.38e-12!25;UBERON:0006235!5.38e-12!25;UBERON:0004161!5.38e-12!25;UBERON:0005057!1.51e-11!26;UBERON:0009856!1.51e-11!26;UBERON:0002365!9.77e-10!31;UBERON:0002330!9.77e-10!31;UBERON:0002368!1.17e-08!35;UBERON:0005177!5.83e-08!107;UBERON:0009569!1.62e-07!113;UBERON:0006947!3.35e-07!3;UBERON:0004054!3.35e-07!3;UBERON:0000949!8.65e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.72e-21;19!UBERON:0006925;2.72e-21;19!UBERON:0002423;2.58e-16;25!UBERON:0002365;3.98e-13;31!UBERON:0002330;3.98e-13;31!UBERON:0005172;9.89e-13;52!UBERON:0005173;9.89e-13;52!UBERON:0002368;4.50e-11;33!UBERON:0002417;1.64e-09;58!UBERON:0000916;1.64e-09;58!UBERON:0000949;4.60e-08;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.72e-21,19;UBERON:0006925,2.72e-21,19;UBERON:0008836,2.72e-21,19;UBERON:0008835,1.82e-18,22;UBERON:0003894,1.82e-18,22;UBERON:0009854,1.10e-17,23;UBERON:0005172,1.25e-16,54;UBERON:0005173,1.25e-16,54;UBERON:0007499,2.58e-16,25;UBERON:0009497,2.58e-16,25;UBERON:0000015,2.58e-16,25;UBERON:0002423,2.58e-16,25;UBERON:0006235,2.58e-16,25;UBERON:0004161,2.58e-16,25;UBERON:0009856,1.05e-15,26;UBERON:0002417,5.51e-15,60;UBERON:0000916,5.51e-15,60;UBERON:0002365,2.97e-13,31;UBERON:0002330,2.97e-13,31;UBERON:0002368,8.60e-12,35;UBERON:0000949,2.89e-09,45;UBERON:0005177,6.14e-09,101;UBERON:0009569,4.62e-08,112;UBERON:0003929,8.77e-08,54;UBERON:0002530,3.74e-07,59 | |||
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|short_description=p4@AGXT2 | |||
}} | }} |
Latest revision as of 18:03, 17 September 2015
Short description: | p4@AGXT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AGXT2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 19bp_to_ENST00000505542_5end |
EntrezGene: | AGXT2 |
HGNC: | 14412 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.44e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.72e-21 | 19 |
digestive gland | 2.72e-21 | 19 |
liver bud | 2.72e-21 | 19 |
hepatic diverticulum | 1.82e-18 | 22 |
liver primordium | 1.82e-18 | 22 |
digestive tract diverticulum | 1.10e-17 | 23 |
abdomen element | 1.25e-16 | 54 |
abdominal segment element | 1.25e-16 | 54 |
epithelial sac | 2.58e-16 | 25 |
epithelium of foregut-midgut junction | 2.58e-16 | 25 |
anatomical boundary | 2.58e-16 | 25 |
hepatobiliary system | 2.58e-16 | 25 |
foregut-midgut junction | 2.58e-16 | 25 |
septum transversum | 2.58e-16 | 25 |
sac | 1.05e-15 | 26 |
abdominal segment of trunk | 5.51e-15 | 60 |
abdomen | 5.51e-15 | 60 |
exocrine gland | 2.97e-13 | 31 |
exocrine system | 2.97e-13 | 31 |
endocrine gland | 8.60e-12 | 35 |
endocrine system | 2.89e-09 | 45 |
trunk region element | 6.14e-09 | 101 |
subdivision of trunk | 4.62e-08 | 112 |
gut epithelium | 8.77e-08 | 54 |
gland | 3.74e-07 | 59 |