FFCP PHASE1:Hg19::chr4:40195262..40195298,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=399 | |EntrezGene=399 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=686 | |HGNC=686 | ||
|TSSclassifier=strong | |||
|UniProt=D6RG23 | |UniProt=D6RG23 | ||
|association_with_transcript=0bp_to_ENST00000503941_5end | |||
|cluster_id=chr4:40195262..40195298,+ | |||
|description=CAGE_peak_7_at_RHOH_5end | |||
|id=chr4:40195262..40195298,+ | |||
|ontology_enrichment_celltype=CL:0000542!6.21e-50!53;CL:0000051!6.21e-50!53;CL:0000838!6.20e-48!52;CL:0000945!1.44e-32!24;CL:0000826!1.44e-32!24;CL:0002087!5.00e-20!119;CL:0000084!4.07e-18!25;CL:0000827!4.07e-18!25;CL:0000236!1.92e-17!14;CL:0000738!2.35e-17!140;CL:0000037!5.39e-17!172;CL:0000566!5.39e-17!172;CL:0002031!1.87e-16!124;CL:0002032!2.08e-15!165;CL:0000837!2.08e-15!165;CL:0000988!2.47e-15!182;CL:0000625!1.46e-14!11;CL:0000791!2.05e-14!18;CL:0000789!2.05e-14!18;CL:0002420!2.05e-14!18;CL:0002419!2.05e-14!18;CL:0000790!2.05e-14!18;CL:0000817!5.31e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.84e-43;24!CL:0000236;4.73e-29;13!CL:0000542;2.00e-25;53!CL:0000625;3.21e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.63e-43,24;CL:0000826,4.63e-43,24;CL:0000542,2.61e-40,53;CL:0000051,2.61e-40,53;CL:0000838,3.56e-37,52;CL:0000236,8.77e-27,14;CL:0002087,1.11e-15,115;CL:0000738,5.79e-14,136;CL:0002031,3.03e-13,120;CL:0000037,2.36e-10,168;CL:0002032,7.70e-10,161;CL:0000837,7.70e-10,161;CL:0000988,1.42e-09,177;CL:0000625,3.22e-07,11;CL:0000817,3.34e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;2.00e-25;53 | |||
|ontology_enrichment_disease=DOID:0060058!1.94e-13!10;DOID:2531!3.01e-10!51;DOID:0060083!3.01e-10!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;7.64e-13;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,7.12e-13,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!4.91e-08!7;UBERON:0000178!1.68e-07!15;UBERON:0000179!1.68e-07!15;UBERON:0000463!1.68e-07!15;UBERON:0002106!3.42e-07!3;UBERON:0004854!3.42e-07!3;UBERON:0009034!3.42e-07!3;UBERON:0002095!3.42e-07!3;UBERON:0004782!3.42e-07!3;UBERON:0003281!3.42e-07!3;UBERON:0009664!3.42e-07!3;UBERON:0002296!3.42e-07!3;UBERON:0005602!3.42e-07!3;UBERON:0001179!3.42e-07!3;UBERON:0006293!3.42e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;1.31e-16;5!UBERON:0005057;1.31e-16;5!UBERON:0002370;2.45e-11;2!UBERON:0005058;2.45e-11;2!UBERON:0009113;2.45e-11;2!UBERON:0002106;1.07e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,8.26e-12,7;UBERON:0005057,8.26e-12,7;UBERON:0002106,1.44e-07,3;UBERON:0004854,1.44e-07,3;UBERON:0009034,1.44e-07,3;UBERON:0002095,1.44e-07,3;UBERON:0004782,1.44e-07,3;UBERON:0003281,1.44e-07,3;UBERON:0009664,1.44e-07,3;UBERON:0002296,1.44e-07,3;UBERON:0005602,1.44e-07,3;UBERON:0001179,1.44e-07,3;UBERON:0006293,1.44e-07,3 | |||
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| ||
|short_description=p7@RHOH | |||
}} | }} |
Latest revision as of 18:06, 17 September 2015
Short description: | p7@RHOH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RHOH_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000503941_5end |
EntrezGene: | RHOH |
HGNC: | 686 |
UniProt: | D6RG23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.63e-43 | 24 |
pro-B cell | 4.63e-43 | 24 |
lymphocyte | 2.61e-40 | 53 |
common lymphoid progenitor | 2.61e-40 | 53 |
lymphoid lineage restricted progenitor cell | 3.56e-37 | 52 |
B cell | 8.77e-27 | 14 |
nongranular leukocyte | 1.11e-15 | 115 |
leukocyte | 5.79e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 3.03e-13 | 120 |
hematopoietic stem cell | 2.36e-10 | 168 |
hematopoietic oligopotent progenitor cell | 7.70e-10 | 161 |
hematopoietic multipotent progenitor cell | 7.70e-10 | 161 |
hematopoietic cell | 1.42e-09 | 177 |
CD8-positive, alpha-beta T cell | 3.22e-07 | 11 |
precursor B cell | 3.34e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 8.26e-12 | 7 |
immune organ | 8.26e-12 | 7 |
spleen | 1.44e-07 | 3 |
gastrointestinal system mesentery | 1.44e-07 | 3 |
stomach region | 1.44e-07 | 3 |
mesentery | 1.44e-07 | 3 |
gastrointestinal system serosa | 1.44e-07 | 3 |
mesentery of stomach | 1.44e-07 | 3 |
gut mesentery | 1.44e-07 | 3 |
dorsal mesentery | 1.44e-07 | 3 |
dorsal mesogastrium | 1.44e-07 | 3 |
peritoneal cavity | 1.44e-07 | 3 |
spleen primordium | 1.44e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 7.12e-13 | 10 |