FFCP PHASE1:Hg19::chr7:22602879..22602890,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100506178 | |EntrezGene=100506178 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-65bp_to_ENST00000435127,NR_038393_5end | |association_with_transcript=-65bp_to_ENST00000435127,NR_038393_5end | ||
|cluster_id=chr7:22602879..22602890,+ | |||
|description=CAGE_peak_2_at_LOC100506178_5end | |description=CAGE_peak_2_at_LOC100506178_5end | ||
|id=chr7:22602879..22602890,+ | |id=chr7:22602879..22602890,+ | ||
|ontology_enrichment_celltype=CL:0002139!5.40e-13!24;CL:0000071!1.53e-11!18;CL:0002546!1.53e-11!18;CL:0002078!8.15e-09!44;CL:0000115!1.94e-07!35 | |ontology_enrichment_celltype=CL:0002139!5.40e-13!24;CL:0000071!1.53e-11!18;CL:0002546!1.53e-11!18;CL:0002078!8.15e-09!44;CL:0000115!1.94e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0002166;1.96e-24;3!CL:0002138;3.40e-13;6!CL:0000319;9.04e-10;1!CL:0002159;2.45e-09;14!CL:0002139;2.09e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.42e-24,3;CL:0005020,3.34e-13,6;CL:0002138,3.34e-13,6;CL:0005022,3.34e-13,6;CL:0000319,9.44e-10,1;CL:0002159,2.17e-09,14;CL:0002139,2.21e-08,24 | |||
|ontology_enrichment_development_v019=CL:0005022;3.40e-13;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4556;2.19e-11;3!DOID:3030;9.04e-10;1!DOID:3112;1.32e-09;1!DOID:3908;3.55e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,2.71e-11,3;DOID:3030,9.44e-10,1;DOID:3112,1.21e-09,1;DOID:3908,4.03e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000025!4.09e-13!194;UBERON:0004111!2.25e-12!241;UBERON:0001986!1.53e-11!18;UBERON:0004638!1.53e-11!18;UBERON:0004852!1.53e-11!18;UBERON:0000487!3.15e-10!22;UBERON:0000477!5.09e-10!286;UBERON:0000992!3.27e-09!13;UBERON:0003914!7.18e-09!118;UBERON:0000055!1.22e-08!69;UBERON:0006914!1.56e-08!25;UBERON:0001981!7.20e-08!60;UBERON:0007500!7.20e-08!60;UBERON:0004537!7.20e-08!60;UBERON:0006965!7.20e-08!60;UBERON:0000119!1.55e-07!312;UBERON:0002049!2.93e-07!79;UBERON:0007798!2.93e-07!79;UBERON:0000991!3.72e-07!21;UBERON:0009196!3.72e-07!21;UBERON:0009117!3.72e-07!21;UBERON:0005564!3.72e-07!21;UBERON:0000483!4.65e-07!309 | |ontology_enrichment_uberon=UBERON:0000025!4.09e-13!194;UBERON:0004111!2.25e-12!241;UBERON:0001986!1.53e-11!18;UBERON:0004638!1.53e-11!18;UBERON:0004852!1.53e-11!18;UBERON:0000487!3.15e-10!22;UBERON:0000477!5.09e-10!286;UBERON:0000992!3.27e-09!13;UBERON:0003914!7.18e-09!118;UBERON:0000055!1.22e-08!69;UBERON:0006914!1.56e-08!25;UBERON:0001981!7.20e-08!60;UBERON:0007500!7.20e-08!60;UBERON:0004537!7.20e-08!60;UBERON:0006965!7.20e-08!60;UBERON:0000119!1.55e-07!312;UBERON:0002049!2.93e-07!79;UBERON:0007798!2.93e-07!79;UBERON:0000991!3.72e-07!21;UBERON:0009196!3.72e-07!21;UBERON:0009117!3.72e-07!21;UBERON:0005564!3.72e-07!21;UBERON:0000483!4.65e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;1.72e-18;4!UBERON:0008895;1.72e-18;4!UBERON:0011159;6.50e-15;5!UBERON:0011137;7.72e-12;11!UBERON:0010323;7.72e-12;11!UBERON:0001473;5.07e-10;8!UBERON:0004536;5.07e-10;8!UBERON:0006558;5.07e-10;8!UBERON:0002134;3.67e-09;1!UBERON:0005208;3.67e-09;1!UBERON:0004145;3.67e-09;1!UBERON:0005946;3.67e-09;1!UBERON:0005965;3.67e-09;1!UBERON:0002078;3.67e-09;1!UBERON:0000075;3.46e-08;16!UBERON:0002465;4.15e-08;10!UBERON:0002118;2.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,1.36e-18,4;UBERON:0008895,1.36e-18,4;UBERON:0011159,5.37e-15,5;UBERON:0010188,1.36e-12,6;UBERON:0002539,1.36e-12,6;UBERON:0008816,1.36e-12,6;UBERON:0010323,6.80e-12,11;UBERON:0001473,5.00e-10,8;UBERON:0004536,5.00e-10,8;UBERON:0006558,5.00e-10,8;UBERON:0011137,2.22e-09,14;UBERON:0002134,4.15e-09,1;UBERON:0005208,4.15e-09,1;UBERON:0005946,4.15e-09,1;UBERON:0005965,4.15e-09,1;UBERON:0002078,4.15e-09,1;UBERON:0000075,3.18e-08,16;UBERON:0002465,4.10e-08,10;UBERON:0002118,1.88e-07,5;UBERON:0008814,2.32e-07,18 | |||
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| ||
|short_description=p2@LOC100506178 | |short_description=p2@LOC100506178 | ||
}} | }} |
Latest revision as of 19:00, 17 September 2015
Short description: | p2@LOC100506178 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC100506178_5end |
Coexpression cluster: | NA |
Association with transcript: | -65bp_to_ENST00000435127, NR_038393_5end |
EntrezGene: | LOC100506178 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.42e-24 | 3 |
lymphangioblast | 3.34e-13 | 6 |
endothelial cell of lymphatic vessel | 3.34e-13 | 6 |
vascular lymphangioblast | 3.34e-13 | 6 |
mucus secreting cell | 9.44e-10 | 1 |
general ecto-epithelial cell | 2.17e-09 | 14 |
endothelial cell of vascular tree | 2.21e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 1.36e-18 | 4 |
splanchnocranium | 1.36e-18 | 4 |
primary subdivision of cranial skeletal system | 5.37e-15 | 5 |
protuberance | 1.36e-12 | 6 |
pharyngeal arch | 1.36e-12 | 6 |
embryonic head | 1.36e-12 | 6 |
cranial skeletal system | 6.80e-12 | 11 |
lymphatic vessel | 5.00e-10 | 8 |
lymph vasculature | 5.00e-10 | 8 |
lymphatic part of lymphoid system | 5.00e-10 | 8 |
axial skeletal system | 2.22e-09 | 14 |
tricuspid valve | 4.15e-09 | 1 |
right atrium valve | 4.15e-09 | 1 |
outflow tract of atrium | 4.15e-09 | 1 |
outflow part of right atrium | 4.15e-09 | 1 |
right cardiac atrium | 4.15e-09 | 1 |
subdivision of skeletal system | 3.18e-08 | 16 |
lymphoid system | 4.10e-08 | 10 |
right ovary | 1.88e-07 | 5 |
pharyngeal arch system | 2.32e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 2.71e-11 | 3 |
mucinous adenocarcinoma | 9.44e-10 | 1 |
papillary adenocarcinoma | 1.21e-09 | 1 |
non-small cell lung carcinoma | 4.03e-07 | 5 |