FFCP PHASE1:Hg19::chr13:52733980..52734002,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4752 | |EntrezGene=4752 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7746 | |HGNC=7746 | ||
|TSSclassifier=strong | |||
|UniProt=P51956,G3V202 | |UniProt=P51956,G3V202 | ||
|association_with_transcript=0bp_to_ENST00000339406,ENST00000548127,NM_001146099,NM_002498,NR_027415,uc010tgx.1,uc010tgy.1_5end | |association_with_transcript=0bp_to_ENST00000339406,ENST00000548127,NM_001146099,NM_002498,NR_027415,uc010tgx.1,uc010tgy.1_5end | ||
|cluster_id=chr13:52733980..52734002,- | |||
|coexpression_cluster_id=C55 | |coexpression_cluster_id=C55 | ||
|description=CAGE_peak_4_at_NEK3_5end | |description=CAGE_peak_4_at_NEK3_5end | ||
|id=chr13:52733980..52734002,- | |id=chr13:52733980..52734002,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.75e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.77e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.13e-07;11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;1.09e-08;1!DOID:10165;1.09e-08;1!DOID:1798;1.09e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,6.65e-09,1;DOID:10165,6.65e-09,1;DOID:1798,6.65e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002323!5.38e-08!46;UBERON:0000467!9.74e-08!625;UBERON:0000480!1.20e-07!626;UBERON:0004458!5.13e-07!49;UBERON:0000468!6.34e-07!659 | |ontology_enrichment_uberon=UBERON:0002323!5.38e-08!46;UBERON:0000467!9.74e-08!625;UBERON:0000480!1.20e-07!626;UBERON:0004458!5.13e-07!49;UBERON:0000468!6.34e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;1.09e-08;1!UBERON:0005208;1.09e-08;1!UBERON:0004145;1.09e-08;1!UBERON:0005946;1.09e-08;1!UBERON:0005965;1.09e-08;1!UBERON:0002078;1.09e-08;1!UBERON:0005409;5.44e-08;22!UBERON:0000160;8.52e-07;17!UBERON:0002108;8.65e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,9.02e-09,1;UBERON:0005208,9.02e-09,1;UBERON:0005946,9.02e-09,1;UBERON:0005965,9.02e-09,1;UBERON:0002078,9.02e-09,1;UBERON:0005409,4.09e-07,25;UBERON:0002108,6.08e-07,4;UBERON:0000160,6.91e-07,17 | |||
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| ||
|short_description=p4@NEK3 | |short_description=p4@NEK3 | ||
}} | }} |
Latest revision as of 19:27, 17 September 2015
Short description: | p4@NEK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NEK3_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 0bp_to_ENST00000339406, ENST00000548127, NM_001146099, NM_002498, NR_027415, uc010tgx.1, uc010tgy.1_5end |
EntrezGene: | NEK3 |
HGNC: | 7746 |
UniProt: | P51956G3V202 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.77e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 9.02e-09 | 1 |
right atrium valve | 9.02e-09 | 1 |
outflow tract of atrium | 9.02e-09 | 1 |
outflow part of right atrium | 9.02e-09 | 1 |
right cardiac atrium | 9.02e-09 | 1 |
gastrointestinal system | 4.09e-07 | 25 |
small intestine | 6.08e-07 | 4 |
intestine | 6.91e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 6.65e-09 | 1 |
endocrine pancreas cancer | 6.65e-09 | 1 |
pancreatic endocrine carcinoma | 6.65e-09 | 1 |