FFCP PHASE1:Hg19::chr11:35252159..35252170,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=960 | |EntrezGene=960 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1681 | |HGNC=1681 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=93bp_to_AB073901_5end | |association_with_transcript=93bp_to_AB073901_5end | ||
|cluster_id=chr11:35252159..35252170,+ | |||
|description=CAGE_peak_32_at_CD44_5end | |description=CAGE_peak_32_at_CD44_5end | ||
|id=chr11:35252159..35252170,+ | |id=chr11:35252159..35252170,+ | ||
|ontology_enrichment_celltype=CL:0000860!1.28e-09!45;CL:0002057!1.47e-09!42;CL:0002194!3.36e-09!63;CL:0000576!3.36e-09!63;CL:0000040!3.36e-09!63;CL:0000559!3.36e-09!63;CL:0002009!5.11e-09!65;CL:0000557!1.64e-08!71;CL:0000548!2.26e-08!679;CL:0000004!2.26e-08!679;CL:0000255!2.26e-08!679;CL:0000839!2.49e-08!70;CL:0000012!5.56e-08!682;CL:0000766!4.57e-07!76 | |ontology_enrichment_celltype=CL:0000860!1.28e-09!45;CL:0002057!1.47e-09!42;CL:0002194!3.36e-09!63;CL:0000576!3.36e-09!63;CL:0000040!3.36e-09!63;CL:0000559!3.36e-09!63;CL:0002009!5.11e-09!65;CL:0000557!1.64e-08!71;CL:0000548!2.26e-08!679;CL:0000004!2.26e-08!679;CL:0000255!2.26e-08!679;CL:0000839!2.49e-08!70;CL:0000012!5.56e-08!682;CL:0000766!4.57e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000135;9.94e-08;3!CL:0000388;9.94e-08;3!CL:0002567;2.12e-07;3!CL:0002622;2.12e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,8.74e-08,3;CL:0000388,8.74e-08,3;CL:0002622,1.75e-07,3;CL:0002567,3.34e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.33e-16;3!DOID:127;1.33e-16;3!DOID:0060072;1.43e-12;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.53e-16,3;DOID:127,1.53e-16,3;DOID:0060072,1.58e-12,4 | |||
|ontology_enrichment_uberon=UBERON:0002204!4.30e-09!167;UBERON:0002371!9.16e-08!80 | |ontology_enrichment_uberon=UBERON:0002204!4.30e-09!167;UBERON:0002371!9.16e-08!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;9.94e-08;3!UBERON:0000043;9.94e-08;3!UBERON:0007845;9.94e-08;3!UBERON:0002367;3.26e-07;11!UBERON:0010147;3.26e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,8.74e-08,3;UBERON:0000043,8.74e-08,3;UBERON:0007845,8.74e-08,3;UBERON:0002367,2.38e-07,11;UBERON:0010147,2.38e-07,11;UBERON:0009846,2.38e-07,11;UBERON:0003353,2.38e-07,11;UBERON:0004902,2.38e-07,11;UBERON:0003820,2.38e-07,11;UBERON:0009847,2.38e-07,11;UBERON:0003937,9.65e-07,12;UBERON:0005399,9.65e-07,12 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0.331397375727916,2.01697543935533,0.602694528023977,1.46062018077475,0,0,0.204000691244253,0,0,0.547497700291537,0.87879847716362,0.0764134057479513,0.0821005894499457,0,0,0,0.309632246632152,0,0,0,0.0774672005803016,0,0,0.553995408531877,0.200544447470142,0.651032612147555,0,0,0,0.726991193897824,0,0.727752183563449,0.464858073811369,0,0.309706370895104,0.863077176966451,0.256160706529101,0,0,0,0,2.25890807451126,0.272906150057846,0.674170453335254,1.83650335422542,0.320929027076094,0.639337125799041,0.989553900560148,0,0.426224750532694,2.61188314765726,1.13477044938228,0,1.25624332628372,0.521482918420201,0.65156653411535,2.42159801053347,0.368277635987565,0.632924774881769,0.211255286311942,0.425208599930087,0,0.336985893439485,0.600707571366025,0.32145117339416,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0,0.294605907474837,0.443067789167242,0,0.128091319725675,0.390178042679635,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0,0,0,0,0.361439152384566,0,2.31754430337318,0,0,0,0,0,0,0.364295288292542,1.11235332835329,0.324547393654683,0.348259474598534,1.19662164466979,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,1.01304409331664,0.926864265692532,0,1.06400514659507,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0.597794722207204,0,0,0,0.204154171254893,0.61417158655884,0.206651562351531,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0.150238058906597,0.113432183160021,0.358779271377724,0.213557388818567,0.635795703478686,0.600182192168805,0.412210116953756,0,0,0.506328996723799,0,0,0.0920498986422993,0.484938170456436,0.355009592516614,0.10075209822764,0.508681776931463,0.386521706326594,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.236613600079688,0.168584690078102,0,0,0,0.237270619111097,0.269662616320329,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0,0,0,0.686271241194102,0.439001141634502,0,0.301586917234893,0.185176890317059,0.325808305310325,0,1.44331342025273,0.231860809950154,0,0,0,0,0,0,0.984868024349589,0.234004265139238,0.743155811443641,0,0.671928512795438,0.141775097242386,0.268675568108545,0.581267877027924,0,0,0.176096868026452,0.414656231081544,0.144119953416961,0,0.380987365753014,1.14596527667483,1.17217447210047,0,0.514137463516618,0.300343057843917,1.14330573052231,0.112131084345361,0,0.1466765716419,0.258543431515556,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,1.20575750823834,0.871533458600294,0.299918973546171,0,0,0,0.239624855491583,0,0,0.579125226670317,0.410952645100767,0.358121926479791,0.224170287987055,0,0.431255149719035,0,0,0,0,0.502548796003046,0.637938751653163,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0.623912584592421,1.78428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0,0.781952530212746,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0.496215615637554,0.153461973288062,0.561320188866147,0,0,0.804269605718038,1.48418066444991,0.771048469013278,0.532685175939381,0.164254312027618,0.519254429183621,0.581051892299796,0,1.60405176242628,0,1.7222167224691,0,1.18011973463482,0,0.462092022626489,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0.512900250232778,0.328014645699706,0,0.103041011647722,0,0,0,0.650060246036521,0,0.193341436584244,0.308097234229289,0,0.137836572484531,0.322260734604821,0.145016693914229,0.255679882248303,0.534192213880424,1.4875642382488,0.192190067365106,0.893288987462089,0.2023155617111,0,0,0.6970372701606,0.616067160352178,0,0,0,0,0,0,0,0,0.42793898803392,0,0.78494864019923,0.719489830333259,0.274537029736055,0.235624804691373,0,0,0,0.48763373908959,1.21856744815642,0,0.136499911407986,1.27264888758341,1.13008116620243,0,1.99031692572366,0,0.578775534266688,0,0.405820753925408,0,0.281695602532241,0.286822704408103,0,0.35667105148125,0.354761064070598,2.74439925886963,0.329294892959902,0,0,0.192444225451024,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0.0711418433484141,0,0.399158742865633,0,0.211673582723883,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0.66614393599564,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,1.43176155503017,0.246169610922139,0.622079175323615,0.0898683511473268,0,0.511572370226872,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.153900517007594,0.341826167541004,0,0,0,0,0.183195186803725,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0.19566461893209,0.728341138602278,0,0,0,0.126373159256976,0,0,0.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| ||
|short_description=p32@CD44 | |short_description=p32@CD44 | ||
}} | }} |
Latest revision as of 19:49, 17 September 2015
Short description: | p32@CD44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_CD44_5end |
Coexpression cluster: | NA |
Association with transcript: | 93bp_to_AB073901_5end |
EntrezGene: | CD44 |
HGNC: | 1681 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 8.74e-08 | 3 |
tendon cell | 8.74e-08 | 3 |
prostate stromal cell | 1.75e-07 | 3 |
light melanocyte | 3.34e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 8.74e-08 | 3 |
tendon | 8.74e-08 | 3 |
regular connective tissue | 8.74e-08 | 3 |
prostate gland | 2.38e-07 | 11 |
male accessory sex gland | 2.38e-07 | 11 |
embryonic cloacal epithelium | 2.38e-07 | 11 |
epithelium of hindgut | 2.38e-07 | 11 |
urogenital sinus epithelium | 2.38e-07 | 11 |
prostate bud | 2.38e-07 | 11 |
prostate field | 2.38e-07 | 11 |
sex gland | 9.65e-07 | 12 |
male reproductive gland | 9.65e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.53e-16 | 3 |
leiomyoma | 1.53e-16 | 3 |
benign neoplasm | 1.58e-12 | 4 |